Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ZNF827_0002700

Sequence Length

402 nt

GC Content

0.4776

CGGAAAGCUACAAGGAAACACAGAUGGUGAAGAUUAAAGAGGAACCCAUGGAGGUUGACAUCCAGGACUCCCAUGUCUCGAUAUCACCCAGCCGGAAUGUUGGCUACAGCACUUUAAUCGGGCGAGAGAAAACCGAACCCUUACAGAAGAUGCCAGAGGGCAGAGUACCCCCAGAGAGAAACCUCUUCAGUCAGGAUAUCUCUGUGAAAAUGGCUUCCGAGCUCCUCUUUCAACUGUCAGAAAAAGUGAGCAAAGAGCACAAUCAUACAAAAGAAAACACCAUCCGGACCACGACCAGCCCUUUCUUUUCAGAAGACACAUUUAGACAAUCACCAUUCACCUCCAAUUCAAAAGAACUGCUGCCCAGUGACUCCGUGCUGCACGGAAGAAUAUCAGCUCCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-82.7 kcal/mol

Ensemble Metrics

Free Energy: -92.9

Frequency: 0.0000

Diversity: 106.27

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((..........(((......((((((((.((((((((.((...)).....((.(((.(((..((((......)))).))).))).))((((((....))))))......))))))))((((.........(((.....(((((((.((((((.(((((........)))..(((((....)))))...)).)).)))))))))))...((((((....((((((.((((........)))).)).))))...)))).)).......................)))..........))))(((((....)))))..............))))))))....)))............)))(((...((((((((((((...))))).))....))).)).)))

Thermodynamic Ensemble Prediction

(((..........(((......((((((((.((((((((.{{,..{{.{{{,({.{{{.{{{.,{{{{..,...)))}.}}}.}}},}},{{{||..,{{||,,,.}}}},))))))))((({..,......|||..,,}((((((,,((((((.{,(((.......,}}},.(((((....)))))...,,.)).))))))))))}...{{((((,...((((((.((((........)))).)).))))...}})).,,.,|........{{..........||}....},....}}}}|||||||,..}}}}..............))))))))....)))..,{{....}},)))(((...{{({{{((((((...)))))}.}....))},)).)))