Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chrX_0145700

Sequence Length

1485 nt

GC Content

0.4431

GGUUUCCGAUGGCACCUGUGUCAAGGUCUUCCAACAACUCCGGGUCUUCCAGCGACUUCAAGUCUUCCAAUAAUCUCAAGGUCUUCCAGAUAAUCCUGAGCUUCCAGAAAAUCCACAUCUUCCAGACAAUCCAUGUCUUCCGGACAAUCCAUGUCUUCCAAGAAGCUCCAAGUCUUCCAGUAAAUCAAGUCUUCCAGCAAAUCCAGUCUUCCAGCAAUUACUGGUCUUCCACCAAAUCCAGAUCUUCCAGGAAAAUCCACGUCUUCCAGGAAAUCCAUGUCUUCCAAUAAUUUCAAGGUCUUCCAUCAAAUACAGAUCUUCCAGCUAAUCCAUGUCUUCCAGAAAAAUCUGUGUCUUCCACCAAAUCCAAGUCUUCCAGUAAAUCUAGUUCUUCCAGAAAAAUCUAGAUCUUCCAGUCAAUCAGUGUCUUCCAGAAAGAAAUCCAGGUCUUCCAGUCAAUCAGUGUCUUCCAGAAAGAAAUCCAGGUCUUCCAGUCAGUCAGUGUCUUCCAGAAAAAUCUACGUCUUCCACCAAAUCCAGGUCUUCCAGUCAAUCCACAUCUUCCGGAAAAAAUCCAGGUCUUCCAGCCAAUAUAUGUCUUCCUGAAGAUCCACGUCUUCCAGAAAAUCCAUGUCUUCCAGAAAAUCCAUGUCUUCCAGUAACCUCCCAGUCUUCCAGAAAAUCCACGUCUUCCCAACAAUCCAAGUCUUCCGGAUAAUUUGGGUCUUCCUGAAAAUCUACGUCUUCCAAAAAAGCCAUGUCUUCCAGAAAAUCCACAUCUUCCAAUGGCCUCCAGGUCUUCCAGACUAUCCAUGUCUUCCAGAAAAUCCUUGUCUUCCCUUAAAUCUAUAGCUUCCAAAAAAUCCGGGUCUUCCAGGAAAUCCGUGUCUUCCAGCAAGUCCACGUCUUCCAACAAAGCCAUGUCUUCCAGACUAUCCAUGUCUUCCAGAAAAUCCUUGUCUUCCCUCAAAUCCAUAGCUUCCGAAAAAUCCAGGUCUUCCAGGAAAUCCGUGUCUUCCAGCAAAUCCACGUCUUCCAACAAAGCCAUGUCUUCCAUCAAAUUAAUGUCUUCCAGCCUACUUGUGUCUUCCAACAAAGGUACGUCUUCCAACAAAGGUACGUCUUCCAACAAAGGUAUGUCUUCCAACAAAGGUACGUCUUCCAGAAAAUCCACGUCUUCCAACCAAGCCAUGUCUUCCAGAAAAUCCACGUCUUCCAGAAAAUAUAUGUCUUCCAACUAAGCUACGUCUUCCAACAAAUCCAUGUCUUCCUAUAUCUCCAGGUCUUCCAGCAUCUCCAGGGCUUCCAGCAUCUGCUCGUCUUCCAACAUCUCCACGUCUUCCAGCAUCUCUGUGUCUUCCAGCAUCUUCAUGUCUUCCAACAACUACCCAGUCUUCCAUCAACUGGCUCAAUAUCCAUGUCUUCCAACGUCUCCAGUGUGCUGAUCUUCUGACAUUCAGGUCUUCCAGUGUCUGCAAUAUCCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-197.9 kcal/mol

Ensemble Metrics

Free Energy: -234

Frequency: 0.0000

Diversity: 391.97

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((((..(((.((((((((...((....)).)))((.((((((.....(((((((...))))............((((((((...(((((...(((......)))..........((((..(((((.....(((((...))))).....)))))...)))).(((..(((.(((..........))).)))..)))............((((......))))...............((((.(((.(((((.(((((.((..(((.((((..((.((..............)).))..)))).....((((((((((...(((........).))...)))....)))))))............................((((((((((...))))....))))))..............(((..(((..(((.((.....((((((...((.((..((.((.((..(.(.((((........)))).).)..)).)).))......(((....))).........(((.......)))...................(((.((((........(((......)))...(((((..(((..((((((....))))))..)))....))))).)))).)))......)).))...))..)))).....)))))..)))....))).........................)))..)).))))).)))))))).))))...............(((((..........................))))).....(((((...))))).....)))))...)))....)))))..................)))........))))))))......((((...((((.(((.....)))..))))..))))....((((.((((((...((((.......))))...)))......(((........)))...))).))))..........)))))...))))))))))(.((.......(((..................(((((.((.........................((((..((((........))))))))((((...((......)).))))...........((........))......((....(((...)))....))(((((((......(((.(((((.(((..(((..........)))..)))...))))).)))......)))..))))......(((......)))...(((........)))..............)).))))).(((((((((..(((......((((..............((((....((((......))))....))))..............(((((.........)))))..........))))......)))....))).)))))).......((((((..((....)))))))))))......)))

Thermodynamic Ensemble Prediction

((((...,.{((.((((......))))...}},..}}}}(.((((.{{.{((.{(((...||,|..........||..,((,,..,,|||,...||{(((,{{,,,({,........,,,,..(((((.....|||||...}))||.....)))))....,))}|||,.{((.{{{..........}}}.}}}..,}}.....,,{,.....,{....,}))))...............((((.((,{(((((.(((((.{{..{{{.((((..{{.{{..............,}.||..}})).....((((((((,({,.,({........).,,...,)),..})))))))................,...........((((((((({...})))....)))))).,....,........{|.|{,,..{,{{((.....,(({,{,,..,.,...,,.{{.{{....{,{{{{......||}}}},,.|..|}.}}.))..,...,||....,,,.........{{{.......||}...,,.,.............,{.((({........(((......)))...,,,{{..{{{,,((((((....)))))}.,)}}....||||}.|,...|}.....,,}}.,,....,..,}},.....}}}},..}},.....,.,.................,..}}},)))..)).))))).)))))))).))))...............(((((........{,................))))).....(({{,.,.((((.......))))...}}}....}}},}..................|||...........||||..,,,,.((({...((((.(({.....)))..))))..,},,....{{{|.,{{(((...((((.......))))...)))......|||........,,,...,,|.||||..,......,,.||,...}}.||||...((((..,,.......,..))))..}}}}....|||,|{||...............,}}.......((((..((((........))))))))((((...{{......)).))))..........,||.,|||,,.........||.|,||,,...,}}......{{{{{{{......(((.(((((.(((..(((.,,....,}.)))..)))...))))).)))......}))..)})}......,,,......}}}...,,,........|||.....,,|,......,||||}..,{({.,,|)}}.|,......,,........,.....,{((({..,{({{{......||||....}))}......,,......(((((.........)))))..........||||......))),...))).))))))...,,}}|{{{||,,||....,,}))},))).,,.}})).)