Basic Information
Symbol
CCDC18-AS1
RNA class
lncRNA
Alias
ENSG00000223745.1
ENSG00000223745.3
ENSG00000223745.7
ENST00000440778.1
OTTHUMG00000010705.3
RP4-717I23.3
XLOC_000918
linc-TMED5
Location (GRCh38)
1:93261702-93346434
Forensic tag(s)
Other applications
External database
Transcripts
| ID | Sequence | Length | GC content |
|---|---|---|---|
| CCDC18-AS1:1 | GUGGCUGCCGCCGUGGCCGCGUAGCCCGAACGCAGAUCGUGGAAGCCGA… | 1207 nt | 0.4913 |
| CCDC18-AS1:10 | CCGCCCGUUCGCGCUGCCAGCAGCUUCCGCCUGCUACGGUCCUGGCAAG… | 4033 nt | 0.4044 |
| CCDC18-AS1:11 | CCGCCCGUUCGCGCUGCCAGCAGCUUCCGCCUGCUACGGUCCUGGCAAG… | 2973 nt | 0.4184 |
| CCDC18-AS1:12 | UCGCGCUGCCAGCAGCUUCCGCCUGCUACGGUCCUGGCAAGCACCUCGG… | 675 nt | 0.4711 |
| CCDC18-AS1:13 | CGCUGCCAGCAGCUUCCGCCUGCUACGGUCCUGGCAAGCACCUCGGGAU… | 752 nt | 0.4694 |
| CCDC18-AS1:14 | GCCUGCUACGGUCCUGGCAAGCACCUCGGGAUCCCAUUCCUUCACAGGG… | 748 nt | 0.4773 |
| CCDC18-AS1:15 | UGGCAAGCACCUCGGGAUCCCAUUCCUUCACAGGGACCCUAGCCAGUUA… | 1847 nt | 0.4321 |
| CCDC18-AS1:16 | UGGCAAGCACCUCGGGAUCCCAUUCCUUCACAGGGACCCUAGCCAGUUA… | 1952 nt | 0.4283 |
| CCDC18-AS1:17 | CAAGCACCUCGGGAUCCCAUUCCUUCACAGGGACCCUAGCCAGUUAAAG… | 602 nt | 0.4485 |
| CCDC18-AS1:18 | CAUUCCUUCACAGGGACCCUAGCCAGUUAAAGCUGAUACAUUCCUGUGG… | 1456 nt | 0.4299 |
Showing 1 to 10 of 71 entries
Summary
No relevant information is available at the moment.
Forensic Context
A single-nucleus transcriptomics study of human postmortem nucleus accumbens tissue identified the CCDC18-AS1 as a long non-coding RNA downregulated in the ASC.1 astrocyte subcluster in individuals with alcohol use disorder [Van Den Oord et al. DOI:10.1111/Adb.13250].