Basic Information

Symbol
CCDC18-AS1
RNA class
lncRNA
Alias
ENSG00000223745.1 ENSG00000223745.3 ENSG00000223745.7 ENST00000440778.1 OTTHUMG00000010705.3 RP4-717I23.3 XLOC_000918 linc-TMED5
Location (GRCh38)
1:93261702-93346434
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Other applications
External database
HGNC NCBI Ensembl LNCipedia RNAcentral

Transcripts

ID Sequence Length GC content
CCDC18-AS1:28 GACAAAGCCAGGAUUGAAGCUCAUGCGGUCUGGCUCCAGAACAACUCUU… 299 nt 0.4247
CCDC18-AS1:29 GCUCCAGAACAACUCUUCUUCAUAGUUACGUUAUACUGCCCCUGCAUUG… 492 nt 0.3862
CCDC18-AS1:3 CCGACACCCUUUGCGCCACCGGAAGCCUCGUUCCCUCAGAUUUCCCCCU… 12608 nt 0.3921
CCDC18-AS1:30 GCUCCAGAACAACUCUUCUUCAUAGUUACGUUAUACUGCCCCUGCAUUG… 492 nt 0.3902
CCDC18-AS1:31 AUUGUUGGUAUUGAAAAUAACUGAUACCGUGCUUCCAGAAGAUUUUUCU… 418 nt 0.4306
CCDC18-AS1:32 CCUGAGUAGCUGGGAUUACAGGCGCGCACCACCACGCCCGGCUAAUUUU… 6939 nt 0.3929
CCDC18-AS1:33 CCUCCCAGGUUCAAGCGAUUCUCCUGCCUCAGCCUCCCAAGUAGCUGGA… 489 nt 0.4397
CCDC18-AS1:34 CCUCCCGGGUUCAAGUGAUUCUCCUGCCUCAGCCUCCUGAGUAGCUGGG… 489 nt 0.4417
CCDC18-AS1:35 CCAGGCACCAUGCUGGGAGAUAAGGAUCCAACAUAAGACAAACAGUGCU… 269 nt 0.4535
CCDC18-AS1:36 CCAGGCACCAUGCUGGGAGAUAAGGAUCCAACAUAAGACAAACAGUGCU… 235 nt 0.4553
Showing 21 to 30 of 71 entries
Summary

No relevant information is available at the moment.

Forensic Context

A single-nucleus transcriptomics study of human postmortem nucleus accumbens tissue identified the CCDC18-AS1 as a long non-coding RNA downregulated in the ASC.1 astrocyte subcluster in individuals with alcohol use disorder [Van Den Oord et al. DOI:10.1111/Adb.13250].