Basic Information

Symbol
CCDC18-AS1
RNA class
lncRNA
Alias
ENSG00000223745.1 ENSG00000223745.3 ENSG00000223745.7 ENST00000440778.1 OTTHUMG00000010705.3 RP4-717I23.3 XLOC_000918 linc-TMED5
Location (GRCh38)
1:93261702-93346434
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Other applications
External database
HGNC NCBI Ensembl LNCipedia RNAcentral

Transcripts

ID Sequence Length GC content
CCDC18-AS1:37 CAGUGCUGAUGCUUUUGGAAAGCUCAUAUUCAAGCUGGGGAGACAAACA… 448 nt 0.4598
CCDC18-AS1:38 GACAAACAACAUACAAAAACUCACUCUGUCACUCAGGCUGGAGUGCAAU… 262 nt 0.4695
CCDC18-AS1:39 ACAAACAACAUACAAAAACUCACUCUGUCACUCAGGCUGGAGUGCAAUG… 270 nt 0.4704
CCDC18-AS1:4 GUGGCUGCCGCCCUUCCCCCACCCACGCCGGCGGGAGCCGCCCGUUCGC… 969 nt 0.4716
CCDC18-AS1:40 UAGAGAUGCGGUUUCGCCAUGUUGGCCGGGCUGGUCUUGAAGUCCUGAC… 427 nt 0.5152
CCDC18-AS1:41 AGAGAUGCGGUUUCGCCAUGUUGGCCGGGCUGGUCUUGAAGUCCUGACC… 383 nt 0.5091
CCDC18-AS1:42 UGCAAUGGCACGAUCUCGGCUCACUGCAACCUCUGCCUCCCGAGUUCAG… 358 nt 0.5000
CCDC18-AS1:43 AAUGAUGCCAGAUGUCCUGUAUCUUGCACGGUUGUUCCACAUGACAGAA… 321 nt 0.3520
CCDC18-AS1:44 GGGGGCCCGAGGAUUCUAGAGAGAGCACAGCCCAGGCACAGUGGGAGUC… 3839 nt 0.4157
CCDC18-AS1:45 GGGGGCCCGAGGAUUCUAGAGAGAGCACAGCCCAGGCACAGUGGGAGUC… 5863 nt 0.4414
Showing 31 to 40 of 71 entries
Summary

No relevant information is available at the moment.

Forensic Context

A single-nucleus transcriptomics study of human postmortem nucleus accumbens tissue identified the CCDC18-AS1 as a long non-coding RNA downregulated in the ASC.1 astrocyte subcluster in individuals with alcohol use disorder [Van Den Oord et al. DOI:10.1111/Adb.13250].