Basic Information
Symbol
CCDC18-AS1
RNA class
lncRNA
Alias
ENSG00000223745.1
ENSG00000223745.3
ENSG00000223745.7
ENST00000440778.1
OTTHUMG00000010705.3
RP4-717I23.3
XLOC_000918
linc-TMED5
Location (GRCh38)
1:93261702-93346434
Forensic tag(s)
Other applications
External database
Transcripts
| ID | Sequence | Length | GC content |
|---|---|---|---|
| CCDC18-AS1:46 | GGGGGCCCGAGGAUUCUAGAGAGAGCACAGCCCAGGCACAGUGGGAGUC… | 3018 nt | 0.4599 |
| CCDC18-AS1:47 | GGGGGCCCGAGGAUUCUAGAGAGAGCACAGCCCAGGCACAGUGGGAGUC… | 2240 nt | 0.4795 |
| CCDC18-AS1:48 | GGGGGCCCGAGGAUUCUAGAGAGAGCACAGCCCAGGCACAGUGGGAGUC… | 4021 nt | 0.4205 |
| CCDC18-AS1:49 | AGCUUCCGCCUGCUACGGUCCUGGCAAGCACCUCGGGAUCCCAUUCCUU… | 977 nt | 0.4411 |
| CCDC18-AS1:5 | UGGCUGCCGCCCUUCCCCCACCCACGCCGGCGGGAGCCGCCCGUUCGCG… | 2681 nt | 0.4338 |
| CCDC18-AS1:50 | AGCUUCCGCCUGCUACGGUCCUGGCAAGCACCUCGGGAUCCCAUUCCUU… | 4941 nt | 0.4307 |
| CCDC18-AS1:51 | AGCUUCCGCCUGCUACGGUCCUGGCAAGCACCUCGGGAUCCCAUUCCUU… | 729 nt | 0.4636 |
| CCDC18-AS1:52 | AGCUUCCGCCUGCUACGGUCCUGGCAAGCACCUCGGGAUCCCAUUCCUU… | 2952 nt | 0.4157 |
| CCDC18-AS1:53 | AGCUUCCGCCUGCUACGGUCCUGGCAAGCACCUCGGGAUCCCAUUCCUU… | 662 nt | 0.4653 |
| CCDC18-AS1:54 | AGCUUCCGCCUGCUACGGUCCUGGCAAGCACCUCGGGAUCCCAUUCCUU… | 3401 nt | 0.4322 |
Showing 41 to 50 of 71 entries
Summary
No relevant information is available at the moment.
Forensic Context
A single-nucleus transcriptomics study of human postmortem nucleus accumbens tissue identified the CCDC18-AS1 as a long non-coding RNA downregulated in the ASC.1 astrocyte subcluster in individuals with alcohol use disorder [Van Den Oord et al. DOI:10.1111/Adb.13250].