Basic Information

Symbol
CCDC18-AS1
RNA class
lncRNA
Alias
ENSG00000223745.1 ENSG00000223745.3 ENSG00000223745.7 ENST00000440778.1 OTTHUMG00000010705.3 RP4-717I23.3 XLOC_000918 linc-TMED5
Location (GRCh38)
1:93261702-93346434
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Other applications
External database
HGNC NCBI Ensembl LNCipedia RNAcentral

Transcripts

ID Sequence Length GC content
CCDC18-AS1:55 AGCUUCCGCCUGCUACGGUCCUGGCAAGCACCUCGGGAUCCCAUUCCUU… 1316 nt 0.4400
CCDC18-AS1:56 AGCUUCCGCCUGCUACGGUCCUGGCAAGCACCUCGGGAUCCCAUUCCUU… 911 nt 0.4501
CCDC18-AS1:57 AGCUUCCGCCUGCUACGGUCCUGGCAAGCACCUCGGGAUCCCAUUCCUU… 742 nt 0.4650
CCDC18-AS1:58 AGCUUCCGCCUGCUACGGUCCUGGCAAGCACCUCGGGAUCCCAUUCCUU… 755 nt 0.4781
CCDC18-AS1:59 AGCUUCCGCCUGCUACGGUCCUGGCAAGCACCUCGGGAUCCCAUUCCUU… 750 nt 0.4467
CCDC18-AS1:6 GGCUGCCGCCCUUCCCCCACCCACGCCGGCGGGAGCCGCCCGUUCGCGC… 806 nt 0.4727
CCDC18-AS1:60 AGCUUCCGCCUGCUACGGUCCUGGCAAGCACCUCGGGAUCCCAUUCCUU… 583 nt 0.4631
CCDC18-AS1:61 GCAAACAAAGCUCUCAAGUUGGUGAUCCUCAGGAGUCUCUGCAUUAGUU… 5761 nt 0.4209
CCDC18-AS1:62 GCAAACAAAGCUCUCAAGUUGGUGAUCCUCAGGUAAAAUCUAACCUACA… 6666 nt 0.4184
CCDC18-AS1:63 GGAGGUGUCACUGUGAGCUGUGUCGGUGCCUUAAGAGAUAUCUGUUGUG… 417 nt 0.4293
Showing 51 to 60 of 71 entries
Summary

No relevant information is available at the moment.

Forensic Context

A single-nucleus transcriptomics study of human postmortem nucleus accumbens tissue identified the CCDC18-AS1 as a long non-coding RNA downregulated in the ASC.1 astrocyte subcluster in individuals with alcohol use disorder [Van Den Oord et al. DOI:10.1111/Adb.13250].