Basic Information
Symbol
CCDC18-AS1
RNA class
lncRNA
Alias
ENSG00000223745.1
ENSG00000223745.3
ENSG00000223745.7
ENST00000440778.1
OTTHUMG00000010705.3
RP4-717I23.3
XLOC_000918
linc-TMED5
Location (GRCh38)
1:93261702-93346434
Forensic tag(s)
Other applications
External database
Transcripts
| ID | Sequence | Length | GC content |
|---|---|---|---|
| CCDC18-AS1:64 | GGAGGUGUCACUGUGAGCUGUGUCGGUGCCUUAAGAGAUAUCUGUUGUG… | 597 nt | 0.4305 |
| CCDC18-AS1:65 | CUUUUCCUAAUAGAGUGAUUUAAGCCUUCAUUUUUAGACAUCUAAGCCC… | 330 nt | 0.3727 |
| CCDC18-AS1:66 | CUUUUCCUAAUAGAGUGAUUUAAGCCUUCAUUUUUAGACAUCUAAGCCC… | 518 nt | 0.3842 |
| CCDC18-AS1:67 | CUUUUCCUAAUAGAGUGAUUUAAGCCUUCAUUUUUAGACAUCUAAGCCC… | 714 nt | 0.4062 |
| CCDC18-AS1:68 | CUUUUCCUAAUAGAGUGAUUUAAGCCUUCAUUUUUAGACAUCUAAGCCC… | 687 nt | 0.3930 |
| CCDC18-AS1:69 | CUUUUCCUAAUAGAGUGAUUUAAGCCUUCAUUUUUAGACAUCUAAGCCC… | 790 nt | 0.3532 |
| CCDC18-AS1:7 | GCCCUUCCCCCACCCACGCCGGCGGGAGCCGCCCGUUCGCGCUGCCAGC… | 2516 nt | 0.4332 |
| CCDC18-AS1:70 | CUUUUCCUAAUAGAGUGAUUUAAGCCUUCAUUUUUAGACAUCUAAGCCC… | 743 nt | 0.3782 |
| CCDC18-AS1:71 | CUUUUCCUAAUAGAGUGAUUUAAGCCUUCAUUUUUAGACAUCUAAGCCC… | 658 nt | 0.3951 |
| CCDC18-AS1:8 | CCCACCCACGCCGGCGGGAGCCGCCCGUUCGCGCUGCCAGCAGCUUCCG… | 770 nt | 0.4831 |
Showing 61 to 70 of 71 entries
Summary
No relevant information is available at the moment.
Forensic Context
A single-nucleus transcriptomics study of human postmortem nucleus accumbens tissue identified the CCDC18-AS1 as a long non-coding RNA downregulated in the ASC.1 astrocyte subcluster in individuals with alcohol use disorder [Van Den Oord et al. DOI:10.1111/Adb.13250].