Basic Information
Symbol
LINC01948
RNA class
lncRNA
Alias
CTC-236F12.4
ENSG00000248727.5
LOC102467147
XLOC_004829
linc-ANKRD55-6
Location (GRCh38)
5:56448535-56481946
Forensic tag(s)
Other applications
External database
Transcripts
| ID | Sequence | Length | GC content |
|---|---|---|---|
| LINC01948:10 | UCUUGCAGCAUGUCUGCUCUCCUGGCCUGGCCUCUCCAGACCUUUCCCU… | 656 nt | 0.5000 |
| LINC01948:11 | GUCAGUCCUAAGCAGCACAACCUUAGCCACUGUGGAGCUAGUGCCAGCU… | 1892 nt | 0.4767 |
| LINC01948:12 | UACUUUGAAAAUACAUAUUUCACAUUAUAAUAGAAUUUCAUAAUUUAGA… | 378 nt | 0.3968 |
| LINC01948:13 | CAGAGGAGCCCUGAGUGUGGCCCUGAUGACAAGCAGCAGGGAAACCAGG… | 1165 nt | 0.4189 |
| LINC01948:8 | ACAAACAGCUGAAGAUCUGCCUGGACCCCCUACCCCUCUCUUUUUUCCU… | 520 nt | 0.5327 |
| LINC01948:9 | ACAAACAGCUGAAGAUCUGCCUGGACCCCCUACCCCUCUCUUUUUUCCU… | 578 nt | 0.5277 |
Summary
No relevant information is available at the moment.
Forensic Context
A study in human neonates with hypoxic-ischemic encephalopathy (HIE) identified the LINC01948 as one of 11 significant genes in common between high-income country (HIC) and South Asia cohorts associated with adverse outcome, where it was upregulated in the HIC cohort but downregulated in the South Asia cohort in neonates with adverse outcome [Montaldo et al. DOI:10.1001/jamanetworkopen.2023.54433].