Basic Information

Symbol
lnc-COPZ2-1
RNA class
lncRNA
Alias
NFE2L1-DT AC004477.1 ENSG00000263412.1 OTTHUMG00000178705.1 RP5-890E16.2 XLOC_012503 linc-COPZ2
Location (GRCh38)
17:48038796-48048670
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Other applications
External database
HGNC NCBI Ensembl LNCipedia RNAcentral

Transcripts

ID Sequence Length GC content
lnc-COPZ2-1:1 GCGCCUUCGCGGCGGGCGAUGUUAGUGGGCUUGGGCGUUGGGUGAAGUA… 539 nt 0.5937
lnc-COPZ2-1:10 AGUGGGCUUGGGCGUUGGGUGAAGUAUCCAGGUUGGGCGCUUCCAGCGC… 2910 nt 0.4921
lnc-COPZ2-1:11 AGUGGGCUUGGGCGUUGGGUGAAGUAUCCAGGUUGGGCGCUUCCAGCGC… 516 nt 0.5872
lnc-COPZ2-1:2 GCGCCUUCGCGGCGGGCGAUGUUAGUGGGCUUGGGCGUUGGGUGAAGUA… 567 nt 0.5908
lnc-COPZ2-1:3 AGUGGGCUUGGGCGUUGGGUGAAGUAUCCAGGUUGGGCGCUUCCAGCGC… 2910 nt 0.4921
lnc-COPZ2-1:4 CUUGGGCGUUGGGUGAAGUAUCCAGGUUGGGCGCUUCCAGCGCUUUCUG… 816 nt 0.5196
lnc-COPZ2-1:5 GUGACUCUCAAACGUUAGUUUACUCCCAGCAUCACUUGGGGAGCUUGCU… 343 nt 0.4927
lnc-COPZ2-1:6 CCCCUCGGCCGCGCCUUCGCGGCGGGCGAUGUUAGUGGGCUUGGGCGUU… 894 nt 0.5559
lnc-COPZ2-1:7 CGGGCGAUGUUAGUGGGCUUGGGCGUUGGGUGAAGUAUCCAGGUUGGGC… 1398 nt 0.4893
lnc-COPZ2-1:8 AACCCUGCCCAGUCCAUCCCACCCCGGAGCCAGCUUUCCUCUCGGCCCC… 9875 nt 0.4876
Showing 1 to 10 of 11 entries
Summary

No relevant information is available at the moment.

Forensic Context

A study in human aortic endothelial cells demonstrated that the lnc-COPZ2-1 was identified as a radiation-responsive long non-coding RNA marker, being commonly regulated across all doses at 24 hours post-irradiation and capable of differentiating unirradiated (0 Gy) samples from dosed samples [Chopra et al. DOI:10.1038/s41598-022-24051-6].