Basic Information
Symbol
lnc-IRX3-80
RNA class
lncRNA
Alias
CRNDE
CRNDEP
ENSG00000245694
ENSG00000245694.4
ENSG00000245694.8
ENSG00000245694.9
ENSG00000261171.1
ENSG00000273615.1
LINC00180
LOC101927480
LOC643911
OTTHUMG00000172236.2
OTTHUMG00000173133.1
RP11-1136G4.1
RP11-1136G4.2
XLOC_011948
XLOC_011949
XLOC_011950
linc-IRX3-1
linc-IRX3-2
linc-IRX3-5
Location (GRCh38)
16:54845189-54930942
Forensic tag(s)
Mechanical injury analysis
Transcripts
| ID | Sequence | Length | GC content |
|---|---|---|---|
| lnc-IRX3-80:1 | CUGCUUUCUCUUUUUUCCCCUCGCUCUUUGCACCGGGGGGCUCUGCUUU… | 8903 nt | 0.4542 |
| lnc-IRX3-80:10 | GGGGUCUCGAUCGCGCUAUUGUCAUGGAGACGGGAAGCUGGCUGCAGCG… | 1144 nt | 0.5044 |
| lnc-IRX3-80:11 | AUUGUCAUGGAGACGGGAAGCUGGCUGCAGCGGCGGCGGGGACCGUGGG… | 18567 nt | 0.3982 |
| lnc-IRX3-80:12 | AUUGUCAUGGAGACGGGAAGCUGGCUGCAGCGGCGGCGGGGACCGUGGG… | 10739 nt | 0.3793 |
| lnc-IRX3-80:13 | AUUGUCAUGGAGACGGGAAGCUGGCUGCAGCGGCGGCGGGGACCGUGGG… | 758 nt | 0.5778 |
| lnc-IRX3-80:14 | AUUGUCAUGGAGACGGGAAGCUGGCUGCAGCGGCGGCGGGGACCGUGGG… | 464 nt | 0.7435 |
| lnc-IRX3-80:15 | CAUGGAGACGGGAAGCUGGCUGCAGCGGCGGCGGGGACCGUGGGGCCGA… | 1034 nt | 0.5174 |
| lnc-IRX3-80:16 | GCUGGCUGCAGCGGCGGCGGGGACCGUGGGGCCGAGGUGGCUGCCAGCC… | 829 nt | 0.5730 |
| lnc-IRX3-80:17 | UGGCUGCAGCGGCGGCGGGGACCGUGGGGCCGAGGUGGCUGCCAGCCGG… | 1092 nt | 0.5577 |
| lnc-IRX3-80:18 | GCUGCAGCGGCGGCGGGGACCGUGGGGCCGAGGUGGCUGCCAGCCGGCC… | 735 nt | 0.5796 |
Showing 1 to 10 of 66 entries
Summary
No relevant information is available at the moment.
Forensic Context
A study in human traumatic brain injury (TBI) patients identified differential expression of numerous long noncoding RNAs (lncRNAs) and mRNAs in contusion tissues [Zhang et al. DOI:10.097/WNR.0000000000001756].