Basic Information
Symbol
lnc-IRX3-80
RNA class
lncRNA
Alias
CRNDE
CRNDEP
ENSG00000245694
ENSG00000245694.4
ENSG00000245694.8
ENSG00000245694.9
ENSG00000261171.1
ENSG00000273615.1
LINC00180
LOC101927480
LOC643911
OTTHUMG00000172236.2
OTTHUMG00000173133.1
RP11-1136G4.1
RP11-1136G4.2
XLOC_011948
XLOC_011949
XLOC_011950
linc-IRX3-1
linc-IRX3-2
linc-IRX3-5
Location (GRCh38)
16:54845189-54930942
Forensic tag(s)
Mechanical injury analysis
Transcripts
| ID | Sequence | Length | GC content |
|---|---|---|---|
| lnc-IRX3-80:19 | GGACCGUGGGGCCGAGGUGGCUGCCAGCCGGCCAAUGUCUAAGCGAGGC… | 641 nt | 0.6193 |
| lnc-IRX3-80:2 | AGACUCUCGAGCGCCGGCCCCAGGAUGACAAUCACAUCCCAGGAGCGCC… | 19697 nt | 0.4099 |
| lnc-IRX3-80:20 | GGACCGUGGGGCCGAGGUGGCUGCCAGCCGGCCAAUGUCUAAGCGAGGC… | 1023 nt | 0.5152 |
| lnc-IRX3-80:21 | GCAGCCGCAGCCCCUGGCGCUAACGGUCGGUAACGGCCCGCGCGCGCCG… | 600 nt | 0.4733 |
| lnc-IRX3-80:22 | GCAGCCGCAGCCCCUGGCGCUAACGGUCGGUAACGGCCCGCGCGCGCCG… | 13507 nt | 0.3665 |
| lnc-IRX3-80:23 | GCAGCCGCAGCCCCUGGCGCUAACGGUCGGUAACGGCCCGCGCGCGCCG… | 8332 nt | 0.3680 |
| lnc-IRX3-80:24 | GCAGCCGCAGCCCCUGGCGCUAACGGUCGGUAACGGCCCGCGCGCGCCG… | 6606 nt | 0.3691 |
| lnc-IRX3-80:25 | GCAGCCGCAGCCCCUGGCGCUAACGGUCGGUAACGGCCCGCGCGCGCCG… | 749 nt | 0.4179 |
| lnc-IRX3-80:26 | GCAGCCGCAGCCCCUGGCGCUAACGGUCGGUAACGGCCCGCGCGCGCCG… | 757 nt | 0.5918 |
| lnc-IRX3-80:27 | GCAGCCGCAGCCCCUGGCGCUAACGGUCGGUAACGGCCCGCGCGCGCCG… | 533 nt | 0.4765 |
Showing 11 to 20 of 66 entries
Summary
No relevant information is available at the moment.
Forensic Context
A study in human traumatic brain injury (TBI) patients identified differential expression of numerous long noncoding RNAs (lncRNAs) and mRNAs in contusion tissues [Zhang et al. DOI:10.097/WNR.0000000000001756].