Basic Information
Symbol
lnc-IRX3-80
RNA class
lncRNA
Alias
CRNDE
CRNDEP
ENSG00000245694
ENSG00000245694.4
ENSG00000245694.8
ENSG00000245694.9
ENSG00000261171.1
ENSG00000273615.1
LINC00180
LOC101927480
LOC643911
OTTHUMG00000172236.2
OTTHUMG00000173133.1
RP11-1136G4.1
RP11-1136G4.2
XLOC_011948
XLOC_011949
XLOC_011950
linc-IRX3-1
linc-IRX3-2
linc-IRX3-5
Location (GRCh38)
16:54845189-54930942
Forensic tag(s)
Mechanical injury analysis
Transcripts
| ID | Sequence | Length | GC content |
|---|---|---|---|
| lnc-IRX3-80:28 | GCAGCCGCAGCCCCUGGCGCUAACGGUCGGUAACGGCCCGCGCGCGCCG… | 600 nt | 0.4733 |
| lnc-IRX3-80:29 | GCCCGCCGGGGGCUCGCGCCAGCCACGAGGGAGCGUCCGCGGCCCGCGC… | 2705 nt | 0.3516 |
| lnc-IRX3-80:3 | AGACUCUCGAGCGCCGGCCCCAGGAUGACAAUCACAUCCCAGGAGCGCC… | 18885 nt | 0.4198 |
| lnc-IRX3-80:30 | CGCCGGGGGCUCGCGCCAGCCACGAGGGAGCGUCCGCGGCCCGCGCGCC… | 5766 nt | 0.3484 |
| lnc-IRX3-80:31 | GAGGGAGCGUCCGCGGCCCGCGCGCCCGCGCGGCGGAGGAGAGGUGUUA… | 459 nt | 0.4205 |
| lnc-IRX3-80:32 | GGAGCGUCCGCGGCCCGCGCGCCCGCGCGGCGGAGGAGAGGUGUUAAGU… | 4544 nt | 0.3440 |
| lnc-IRX3-80:33 | CCCGCGCGCCCGCGCGGCGGAGGAGAGGUGUUAAGUGUGAUGCUUCCAU… | 643 nt | 0.3655 |
| lnc-IRX3-80:34 | CCCGCGCGCCCGCGCGGCGGAGGAGAGGUGUUAAGUGUGAUGCUUCCAU… | 659 nt | 0.3627 |
| lnc-IRX3-80:35 | CGGAGGAGAGGUGUUAAGUGUGAUGCUUCCAUAAUACAUUUGGAUGCUG… | 496 nt | 0.3649 |
| lnc-IRX3-80:36 | GGAGGAGAGGUGAGCCCCCGCCCGGGCCAGGCCCUCUGGCCGCGCCGUC… | 921 nt | 0.4701 |
Showing 21 to 30 of 66 entries
Summary
No relevant information is available at the moment.
Forensic Context
A study in human traumatic brain injury (TBI) patients identified differential expression of numerous long noncoding RNAs (lncRNAs) and mRNAs in contusion tissues [Zhang et al. DOI:10.097/WNR.0000000000001756].