Basic Information
Symbol
lnc-IRX3-80
RNA class
lncRNA
Alias
CRNDE
CRNDEP
ENSG00000245694
ENSG00000245694.4
ENSG00000245694.8
ENSG00000245694.9
ENSG00000261171.1
ENSG00000273615.1
LINC00180
LOC101927480
LOC643911
OTTHUMG00000172236.2
OTTHUMG00000173133.1
RP11-1136G4.1
RP11-1136G4.2
XLOC_011948
XLOC_011949
XLOC_011950
linc-IRX3-1
linc-IRX3-2
linc-IRX3-5
Location (GRCh38)
16:54845189-54930942
Forensic tag(s)
Mechanical injury analysis
Transcripts
| ID | Sequence | Length | GC content |
|---|---|---|---|
| lnc-IRX3-80:37 | GGAGGAGAGGUGAGCCCCCGCCCGGGCCAGGCCCUCUGGCCGCGCCGUC… | 922 nt | 0.4696 |
| lnc-IRX3-80:38 | GGAGGAGAGGUGAGCCCCCGCCCGGGCCAGGCCCUCUGGCCGCGCCGUC… | 850 nt | 0.4847 |
| lnc-IRX3-80:39 | GUGUCCCCUCGUGGGCCGAACGGACGCGGCGGUGCCCCGCGCCCGACCA… | 587 nt | 0.5230 |
| lnc-IRX3-80:4 | AGACUCUCGAGCGCCGGCCCCAGGAUGACAAUCACAUCCCAGGAGCGCC… | 15622 nt | 0.4087 |
| lnc-IRX3-80:40 | GUCCACGCCUGUUCCCUUCGUCGCCGCGGCUCUCGUCCGGGACACGGCU… | 17959 nt | 0.3847 |
| lnc-IRX3-80:41 | GUCCACGCCUGUUCCCUUCGUCGCCGCGGCUCUCGUCCGGGACACGGCU… | 627 nt | 0.3796 |
| lnc-IRX3-80:42 | GUCCACGCCUGUUCCCUUCGUCGCCGCGGCUCUCGUCCGGGACACGGCU… | 709 nt | 0.3709 |
| lnc-IRX3-80:43 | CGCCUGUUCCCUUCGUCGCCGCGGCUCUCGUCCGGGACACGGCUUUCCG… | 6796 nt | 0.3882 |
| lnc-IRX3-80:44 | CCCUUCGUCGCCGCGGCUCUCGUCCGGGACACGGCUUUCCGGAGUAGAG… | 628 nt | 0.3822 |
| lnc-IRX3-80:45 | CCCUUCGUCGCCGCGGCUCUCGUCCGGGACACGGCUUUCCGGAGUAGAG… | 591 nt | 0.3824 |
Showing 31 to 40 of 66 entries
Summary
No relevant information is available at the moment.
Forensic Context
A study in human traumatic brain injury (TBI) patients identified differential expression of numerous long noncoding RNAs (lncRNAs) and mRNAs in contusion tissues [Zhang et al. DOI:10.097/WNR.0000000000001756].