Basic Information
Symbol
lnc-IRX3-80
RNA class
lncRNA
Alias
CRNDE
CRNDEP
ENSG00000245694
ENSG00000245694.4
ENSG00000245694.8
ENSG00000245694.9
ENSG00000261171.1
ENSG00000273615.1
LINC00180
LOC101927480
LOC643911
OTTHUMG00000172236.2
OTTHUMG00000173133.1
RP11-1136G4.1
RP11-1136G4.2
XLOC_011948
XLOC_011949
XLOC_011950
linc-IRX3-1
linc-IRX3-2
linc-IRX3-5
Location (GRCh38)
16:54845189-54930942
Forensic tag(s)
Mechanical injury analysis
Transcripts
| ID | Sequence | Length | GC content |
|---|---|---|---|
| lnc-IRX3-80:46 | CCCUUCGUCGCCGCGGCUCUCGUCCGGGACACGGCUUUCCGGAGUAGAG… | 614 nt | 0.3746 |
| lnc-IRX3-80:47 | CCCUUCGUCGCCGCGGCUCUCGUCCGGGACACGGCUUUCCGGAGUAGAG… | 696 nt | 0.3664 |
| lnc-IRX3-80:48 | CUUGGAGGUGUUAAGUGUGAUGCUUCCAUAAUACAUUUGGAUGCUGUCA… | 1498 nt | 0.3625 |
| lnc-IRX3-80:49 | UGUACUGUCUUCUUUUUGGUGUCAGGGGCUGGAGAGACUCCUGCAAGAU… | 11296 nt | 0.3633 |
| lnc-IRX3-80:5 | AGACUCUCGAGCGCCGGCCCCAGGAUGACAAUCACAUCCCAGGAGCGCC… | 18868 nt | 0.3964 |
| lnc-IRX3-80:50 | UGUACUGUCUUCUUUUUGGUGUCAGGGGCUGGAGAGACUCCUGCAAGAU… | 8721 nt | 0.3701 |
| lnc-IRX3-80:51 | CAUGUCUGCACCGAUCCAGUUUCGCAUAACUCUUAAAAUUUAAAGCUUU… | 8960 nt | 0.3675 |
| lnc-IRX3-80:52 | GCUGUUUAUAGGGAAUAAUUUUUCUUAAUAGAAUAGCAGCUGGUGCAAC… | 6488 nt | 0.3261 |
| lnc-IRX3-80:53 | GCUUCCAUAAUACAUUUGGAUGCUGUCAGCUAAGUUCACUUCUGAACUA… | 415 nt | 0.3711 |
| lnc-IRX3-80:54 | UCCUCCAAAUGUUGGCUGAAAUUCAUCCCAAGGCUGGUCUGCAAAGUCU… | 2601 nt | 0.4164 |
Showing 41 to 50 of 66 entries
Summary
No relevant information is available at the moment.
Forensic Context
A study in human traumatic brain injury (TBI) patients identified differential expression of numerous long noncoding RNAs (lncRNAs) and mRNAs in contusion tissues [Zhang et al. DOI:10.097/WNR.0000000000001756].