Basic Information
Symbol
lnc-IRX3-80
RNA class
lncRNA
Alias
CRNDE
CRNDEP
ENSG00000245694
ENSG00000245694.4
ENSG00000245694.8
ENSG00000245694.9
ENSG00000261171.1
ENSG00000273615.1
LINC00180
LOC101927480
LOC643911
OTTHUMG00000172236.2
OTTHUMG00000173133.1
RP11-1136G4.1
RP11-1136G4.2
XLOC_011948
XLOC_011949
XLOC_011950
linc-IRX3-1
linc-IRX3-2
linc-IRX3-5
Location (GRCh38)
16:54845189-54930942
Forensic tag(s)
Mechanical injury analysis
Transcripts
| ID | Sequence | Length | GC content |
|---|---|---|---|
| lnc-IRX3-80:55 | UACAGUAAAUAGAUAAAUUUUAGGUUCAUGAAAUAAAACUGAAUAAUUU… | 7213 nt | 0.3548 |
| lnc-IRX3-80:56 | GCAUGCUUUUUGAGAAGUGUAUCAUCUAGGAAGAAAAUCAAAUGGAGUA… | 464 nt | 0.3427 |
| lnc-IRX3-80:57 | UAUAAAAAUAAAUUUAUUUUUAGUCCAUCAAGGUGUCUGAAGAUUUUAU… | 659 nt | 0.2929 |
| lnc-IRX3-80:58 | UGAAAUGACUUGCUACAACUUCGUCUUUUCUCAUUGGACCUUGAGAACA… | 2483 nt | 0.4144 |
| lnc-IRX3-80:59 | CAACUUCGUCUUUUCUCAUUGGACCUUGAGAACAAUGCAGAGAUUGCAU… | 2340 nt | 0.3556 |
| lnc-IRX3-80:6 | AGACUCUCGAGCGCCGGCCCCAGGAUGACAAUCACAUCCCAGGAGCGCC… | 1160 nt | 0.6207 |
| lnc-IRX3-80:60 | ACUCUCUCUUCUGCUUUGCCGUGGUAAGACGUGCCUGCUUCCCCUUCGC… | 865 nt | 0.4728 |
| lnc-IRX3-80:61 | CGCACCACGACACCUGGCUAAUUUUUUGUAUUUUUGGUAGAGAGAGGGU… | 1094 nt | 0.4150 |
| lnc-IRX3-80:62 | GACGUAAACCUUUAUUGUAUUAAGCCACUGAGCAUUGGAGGUUGUUUCU… | 719 nt | 0.4381 |
| lnc-IRX3-80:63 | GCUGGAAAAGGUUUCUGCCACUACCUUCCUAGACUCAUCUAAGUGGAUG… | 363 nt | 0.4573 |
Showing 51 to 60 of 66 entries
Summary
No relevant information is available at the moment.
Forensic Context
A study in human traumatic brain injury (TBI) patients identified differential expression of numerous long noncoding RNAs (lncRNAs) and mRNAs in contusion tissues [Zhang et al. DOI:10.097/WNR.0000000000001756].