Basic Information

Symbol
lnc-PRIMPOL-7
RNA class
lncRNA
Alias
IRF2-DT AC099343.3 ENSG00000271646.1 RP11-326I11.3 XLOC_003807 linc-CCDC111-2
Location (GRCh38)
4:184474708-184490925
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Forensic psychiatry evaluation
External database
HGNC NCBI Ensembl LNCipedia RNAcentral

Transcripts

ID Sequence Length GC content
lnc-PRIMPOL-7:1 GCGCGAGCGGCCCGGCCGGGAGGUGCGGAAGUUCGCCGCAGCAGCUCAU… 1321 nt 0.5329
lnc-PRIMPOL-7:2 AUUUUCGCUUCCCCAGGUCGCGGCGGCGGGAGCAACAAGCAGCGGCUCG… 2241 nt 0.4931
lnc-PRIMPOL-7:3 AUUUUCGCUUCCCCAGGUCGCGGCGGCGGGAGCAACAAGCAGCGGCUCG… 2503 nt 0.5034
lnc-PRIMPOL-7:4 GCUUCCCCAGGUCGCGGCGGCGGGAGCAACAAGCAGCGGCUCGUGAGUC… 2497 nt 0.5042
lnc-PRIMPOL-7:5 GCUUCCCCAGGUCGCGGCGGCGGGAGCAACAAGCAGCGGCUCGUGAGUC… 7185 nt 0.4422
lnc-PRIMPOL-7:6 GCUUCCCCAGGUCGCGGCGGCGGGAGCAACAAGCAGCGGCUCGUGAGUC… 9855 nt 0.4419
lnc-PRIMPOL-7:7 GCUUCCCCAGGUCGCGGCGGCGGGAGCAACAAGCAGCGGCUCGUGAGUC… 2095 nt 0.4663
lnc-PRIMPOL-7:8 GCUUCCCCAGGUCGCGGCGGCGGGAGCAACAAGCAGCGGCUCGUGAGUC… 2661 nt 0.5073
lnc-PRIMPOL-7:9 AACAAGCAGCGGCUCGUGAGUCCGCGGCUCGCACCCAGGGGCGCCCGCA… 7559 nt 0.4416
Summary

No relevant information is available at the moment.

Forensic Context

A review of human postmortem brain studies found the lnc-PRIMPOL-7 is differentially expressed in the brains of depressed patients who died by suicide [Song et al. DOI:10.1007/s00414-023-03091-1], and another review noted it is downregulated in the anterior cingulate cortex of major depressive disorder suicide subjects and correlated with IRF2 [Yoshino & Dwivedi DOI:10.3389/fpsyt.2020.543893].