Basic Information

Symbol
lnc-RAB40B-1
RNA class
lncRNA
Alias
AC024361.1 AC024361.2 ENSG00000245109 ENSG00000263063.1 LOC101929552 OTTHUMG00000177809.1 RP11-388C12.1 XLOC_012596 linc-RAB40B
Location (GRCh38)
17:82704137-82716488
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Drug abuse diagnoses
External database
NCBI LNCipedia RNAcentral

Transcripts

ID Sequence Length GC content
lnc-RAB40B-1:1 GGGGUGCACGUGCAACGGAGACACCGCCCCUAAACCUGGGGCCCUGAGG… 894 nt 0.5089
lnc-RAB40B-1:2 GGGGUGCACGUGCAACGGAGACACCGCCCCUAAACCUGGGGCCCUGAGG… 898 nt 0.5089
lnc-RAB40B-1:3 CUCACGCCUGUAAUCCCAGCACUUUGGGAGGCUGAGGCGGGCGGAUCAU… 227 nt 0.5198
lnc-RAB40B-1:4 GUCUUUUAUGGACCAAAUGUUUGUGUGCCCCCAGAUUAAUCCACUGGAA… 403 nt 0.5633
lnc-RAB40B-1:5 GGGGCCUGACCGACCCCGACCCAGACGGUUUGGGUUCAACUCUCCUGCA… 2236 nt 0.5716
lnc-RAB40B-1:6 GGGGCCUGACCGACCCCGACCCAGACGGUUUGGGUUCAACUCUCCUGCA… 1131 nt 0.5181
lnc-RAB40B-1:7 GGGGCCUGACCGACCCCGACCCAGACGGUUUGGGUUCAACUCUCCUGCA… 1894 nt 0.5681
lnc-RAB40B-1:8 GGUGCACGUGCAACGGAGACACCGCCCCUAAACCUGGGGCCCUGAGGCU… 896 nt 0.5078
Summary

No relevant information is available at the moment.

Forensic Context

A study in human postmortem midbrain demonstrated that the lnc-RAB40B-1 was down-regulated (-1.33-fold) in chronic cocaine abusers compared to matched controls, as identified via a custom lncRNA microarray [Bannon et al. DOI:10.1111/jnc.13255].