Basic Information

Symbol
lnc-SNRPN-1
RNA class
lncRNA
Alias
PWAR5 AC124312.4 AC124312.5 ENSG00000270704.2 ENSG00000270704.3 ENSG00000271347.1 RP11-701H24.5 RP11-701H24.7 SNORD64
Location (GRCh38)
15:24984854-24998544
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Other applications
External database
HGNC NCBI Ensembl OMIM LNCipedia RNAcentral

Transcripts

ID Sequence Length GC content
lnc-SNRPN-1:10 CGUUUGUUUCCUUCAUGUAGAUUGCUGUGUGUGUCUUUUUCUUCAUAAU… 320 nt 0.3781
lnc-SNRPN-1:11 CGUUUGUUUCCUUCAUGUAGAUUGCUGUGUGUGUCUUUUUCUUCAUAAU… 13183 nt 0.3440
lnc-SNRPN-1:12 UUUCCUUCAUGUAGAUUGCUGUGUGUGUCUUUUUCUUCAUAAUUCCCCU… 3373 nt 0.3575
lnc-SNRPN-1:13 CUUCAUGUAGAUUGCUGUGUGUGUCUUUUUCUUCAUAAUUCCCCUUAAU… 310 nt 0.3774
lnc-SNRPN-1:14 GAUACUUCACAGAUGACUUAAAAUAAAUCCCCUGAAAAUAAGAAUCUCU… 2697 nt 0.3393
lnc-SNRPN-1:15 CAAUUCUGUAUUCACUUUUUGAGUGCAUAAGGGUAAUAGAAAAUGACAU… 268 nt 0.2649
lnc-SNRPN-1:16 CCUGGAUAGAGCUGGAGACCAUUUAACUGCUGUAUGAAUAAUAGAUAAG… 567 nt 0.3880
Summary

No relevant information is available at the moment.

Forensic Context

A study in human and mouse models demonstrated that the lncRNA PWAR5 is downregulated in liver tissue and its expression is associated with poor prognostic outcomes specifically in HCV-related hepatocellular carcinoma [Machida DOI:10.1016/J.Cbi.2020.109055].