Basic Information

Symbol
lnc-TMPRSS2-83
RNA class
lncRNA
Alias
AL773572.1 AL773572.7 ENSG00000225745.4 ENSG00000225745.8 ENSG00000226496.1 ENSG00000226496.2 ENSG00000280109.3 FLJ37173 LINC00323 OTTHUMG00000086741.1 OTTHUMG00000086744.2 PLAC4 PRED42
Location (GRCh38)
21:41141493-41237583
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Sudden cardiac death diagnosis
External database
HGNC NCBI Ensembl LNCipedia RNAcentral

Transcripts

ID Sequence Length GC content
lnc-TMPRSS2-83:1 CGAAGCCCGUCCAGCUUCCUUGUGUGUACUUCACUGUGACGUCAAAGCC… 71341 nt 0.4666
lnc-TMPRSS2-83:10 ACUCGCGCACACCCCUCAGUGCGCCCCGGGCGGGGGCUGCCGUCCUCCG… 2458 nt 0.5085
lnc-TMPRSS2-83:11 ACUCGCGCACACCCCUCAGUGCGCCCCGGGCGGGGGCUGCCGUCCUCCG… 1230 nt 0.7553
lnc-TMPRSS2-83:12 UUUCAAGGAACAACAGAGAGAUGGUAUUUCCAGACAAGGGAAUAAAUUC… 2088 nt 0.4856
lnc-TMPRSS2-83:13 UUUCAAGGAACAACAGAGAGAUGGUAUUUCCAGACAAGGGAAUAAAUUC… 2095 nt 0.4840
lnc-TMPRSS2-83:14 AAUGAAAAUCCUGGAGAACAGAGUGGAAGAAACGCGUAUUCCACAUUUC… 2019 nt 0.4869
lnc-TMPRSS2-83:15 AUGAAAAUCCUGGAGAACAGAGUGGAAGAAACGCGUAUUCCACAUUUCC… 2805 nt 0.4948
lnc-TMPRSS2-83:16 AUGAAAAUCCUGGAGAACAGAGUGGAAGAAACGCGUAUUCCACAUUUCC… 2018 nt 0.4871
lnc-TMPRSS2-83:17 AUGAAAAUCCUGGAGAACAGAGUGGAAGAAACGCGUAUUCCACAUUUCC… 989 nt 0.4985
lnc-TMPRSS2-83:18 AUGAAAAUCCUGGAGAACAGAGUGGAAGAAACGCGUAUUCCACAUUUCC… 1210 nt 0.5157
Showing 1 to 10 of 20 entries
Summary

No relevant information is available at the moment.

Forensic Context

A study in human patients demonstrated that the lnc-TMPRSS2-83 is upregulated in myocardial fibrosis versus acute myocardial infarction and downregulated in heart failure versus myocardial fibrosis, and it showed potential diagnostic value for both acute myocardial infarction and heart failure with an area under the curve > 0.6 in ROC analysis [Wang et al. DOI:10.3389/fcvm.2021.664044].