Basic Information

Symbol
lnc-TMPRSS2-83
RNA class
lncRNA
Alias
AL773572.1 AL773572.7 ENSG00000225745.4 ENSG00000225745.8 ENSG00000226496.1 ENSG00000226496.2 ENSG00000280109.3 FLJ37173 LINC00323 OTTHUMG00000086741.1 OTTHUMG00000086744.2 PLAC4 PRED42
Location (GRCh38)
21:41141493-41237583
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Sudden cardiac death diagnosis
External database
HGNC NCBI Ensembl LNCipedia RNAcentral

Transcripts

ID Sequence Length GC content
lnc-TMPRSS2-83:19 AAGUAGUCGAGCUGAAACCCCUGAAAACAAUCGUAGGACGAUGACAAGG… 580 nt 0.5241
lnc-TMPRSS2-83:2 CGAAGCCCGUCCAGCUUCCUUGUGUGUACUUCACUGUGACGUCAAAGCC… 76410 nt 0.4681
lnc-TMPRSS2-83:20 GCUGAAACCCCUGAAAACAAUCGUAGGACGAUGACAAGGUUUUGGCAGC… 349 nt 0.4842
lnc-TMPRSS2-83:3 GCUACUCAGGGCACACAGCCUAUGGAGCAGCCCUGAUCUGCAAGGAGCG… 1004 nt 0.5339
lnc-TMPRSS2-83:4 CAGCCUAUGGAGCAGCCCUGAUCUGCAAGGAGCGGCAUCUCUGGCGCUG… 1011 nt 0.5302
lnc-TMPRSS2-83:5 GUGGUGAAACUGAGUGGACAGCCAAGUGUCCAUAGUACAGCUGCCUCGU… 495 nt 0.5354
lnc-TMPRSS2-83:6 CAAGUGUCCAUAGUACAGCUGCCUCGUGUGGGACCCACUGCUCUAACGA… 336 nt 0.5298
lnc-TMPRSS2-83:7 CGUAGCUCAUAAUCCAUUUUUAUAACACCUUGCUAUCUAUAUUUACACC… 10009 nt 0.4620
lnc-TMPRSS2-83:8 AAAACCUGCUGCACAUAUAUUAACUCUGGACAGGUUGAGGUUAACAUUC… 5588 nt 0.4984
lnc-TMPRSS2-83:9 ACUCGCGCACACCCCUCAGUGCGCCCCGGGCGGGGGCUGCCGUCCUCCG… 2609 nt 0.5059
Showing 11 to 20 of 20 entries
Summary

No relevant information is available at the moment.

Forensic Context

A study in human patients demonstrated that the lnc-TMPRSS2-83 is upregulated in myocardial fibrosis versus acute myocardial infarction and downregulated in heart failure versus myocardial fibrosis, and it showed potential diagnostic value for both acute myocardial infarction and heart failure with an area under the curve > 0.6 in ROC analysis [Wang et al. DOI:10.3389/fcvm.2021.664044].