Basic Information
Symbol
GABPB1-AS1
RNA class
lncRNA
Alias
AC022087.1
CTD-3110H11.2
ENSG00000244879
ENSG00000244879.2
ENSG00000244879.3
ENSG00000244879.4
ENSG00000244879.5
ENSG00000244879.6
ENSG00000246338
OTTHUMG00000172396.1
XLOC_011248
linc-USP8
Location (GRCh38)
15:50353753-50372956
Forensic tag(s)
Sudden cardiac death diagnosis
External database
Transcripts
| ID | Sequence | Length | GC content |
|---|---|---|---|
| GABPB1-AS1:1 | UGAUGAACUGUGCCCUGGCAGAGAUGACCUGGCAAAAUUCUCAACUUCU… | 4133 nt | 0.5086 |
| GABPB1-AS1:10 | GGUGGGUAGGAGUUUGGAAACUAAUGUUCCUGUGCUAACCUUCGUGUCU… | 554 nt | 0.4242 |
| GABPB1-AS1:11 | GGAGUUUGGAAACUAAUGUUCCUGUGCUAACCUUCGUGUCUCUGUGACA… | 717 nt | 0.4073 |
| GABPB1-AS1:12 | GGAGUUUGGAAACUAAUGUUCCUGUGCUAACCUUCGUGUCUCUGUGACA… | 2585 nt | 0.4340 |
| GABPB1-AS1:13 | AGGGGCGUCUGGGCAUGGCUUUCCCAACCUAGUAACUGCAACUUUUAGC… | 7220 nt | 0.4003 |
| GABPB1-AS1:14 | UGUUUAUUUGAGUGAACAUUCAGCUAAUUGUUACAGAAUCGUUGCCCCC… | 507 nt | 0.3925 |
| GABPB1-AS1:15 | AGUGUUAUUUAAUUUUGUUCACUGUGUUUACAGUGCAGUUUUAGUCACC… | 3624 nt | 0.3924 |
| GABPB1-AS1:16 | GAGACGGGGUUUCACCAUGUUGGCCAGGCUGGUCUUGAACUCCUGACCU… | 6557 nt | 0.4287 |
| GABPB1-AS1:17 | ACUAACUUCUGCAUAAUAAAUGAGAGUGGAUCUUUUAAUUCUGAGAUGG… | 16903 nt | 0.4344 |
| GABPB1-AS1:18 | ACUAACUUCUGCAUAAUAAAUGAGAGUGGAUCUUUUAAUUCUGAGAUGG… | 17472 nt | 0.4393 |
Showing 1 to 10 of 34 entries
Summary
No relevant information is available at the moment.
Forensic Context
A study in human patients identified the GABPB1-AS1 as a long non-coding RNA that is upregulated in myocardial fibrosis compared to acute myocardial infarction and downregulated in heart failure compared to myocardial fibrosis, indicating its dynamic expression pattern across cardiac disease progression [Wang et al. DOI:10.3389/fcvm.2021.664044].