Basic Information

Symbol
PCF11-AS1
RNA class
lncRNA
Alias
AP000873.2 ENSG00000247137 ENSG00000247137.2 ENSG00000247137.4 ENSG00000247137.8 ENSG00000269939.1 ENST00000602322.1 OTTHUMG00000167033.1 RP11-727A23.11 RP11-727A23.5
Location (GRCh38)
11:83184491-83194248
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Other applications
External database
HGNC NCBI Ensembl LNCipedia RNAcentral

Transcripts

ID Sequence Length GC content
PCF11-AS1:1 CCCAAGGACCACUGAGGCGGAGGCCUCGGUCUUCUCUGGCUGUUCCCCU… 7804 nt 0.4322
PCF11-AS1:10 CAGCAGGUAAGUUGUAAAACCAGUAAAAAAACACAGGUCAUUAGUCAAA… 2295 nt 0.4135
PCF11-AS1:11 GAAACUACCCUGCUUUUCCCCCAGUUUUGGUCUGUGAACACAUUUGGGA… 375 nt 0.4427
PCF11-AS1:12 ACUCCAAAUUAAUAUAGUGUUUAUAGCCACUUACAUAAUAAUGAGGGUG… 406 nt 0.3645
PCF11-AS1:13 AAAAAUUUUCCCAUUGCUGGUUUUCCCAUUUUCUUUUUGACCUUCCCAC… 1516 nt 0.3562
PCF11-AS1:14 ACUUCCGGUUUCCUUUCCCUCAGCUAUUCCAUGGCUUUUCGUGUGGACA… 418 nt 0.4569
PCF11-AS1:15 ACUUCCGGUUUCCUUUCCCUCAGCUAUUCCAUGGCUUUUCGUGUGGACA… 8806 nt 0.4074
PCF11-AS1:16 ACUUCCGGUUUCCUUUCCCUCAGCUAUUCCAUGGCUUUUCGUGUGGACA… 1313 nt 0.4532
PCF11-AS1:17 ACUUCCGGUUUCCUUUCCCUCAGCUAUUCCAUGGCUUUUCGUGUGGACA… 877 nt 0.4447
PCF11-AS1:18 ACUUCCGGUUUCCUUUCCCUCAGCUAUUCCAUGGCUUUUCGUGUGGACA… 2305 nt 0.4464
Showing 1 to 10 of 25 entries
Summary

No relevant information is available at the moment.

Forensic Context

A study in human aortic endothelial cells demonstrated that the PCF11-AS1 was identified as a radiation-responsive long non-coding RNA, serving as a 0 Gy marker that could differentiate unirradiated samples from those exposed to X-ray doses of 1-10 Gy at the 24-hour post-radiation time point [Chopra et al. DOI:10.1038/s41598-022-24051-6].