Basic Information

Symbol
PCF11-AS1
RNA class
lncRNA
Alias
AP000873.2 ENSG00000247137 ENSG00000247137.2 ENSG00000247137.4 ENSG00000247137.8 ENSG00000269939.1 ENST00000602322.1 OTTHUMG00000167033.1 RP11-727A23.11 RP11-727A23.5
Location (GRCh38)
11:83184491-83194248
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Other applications
External database
HGNC NCBI Ensembl LNCipedia RNAcentral

Transcripts

ID Sequence Length GC content
PCF11-AS1:19 ACUUCCGGUUUCCUUUCCCUCAGCUAUUCCAUGGCUUUUCGUGUGGACA… 3205 nt 0.4346
PCF11-AS1:2 UACUUUCUCGGAGUCUCUUUCCAGCCUCCCGACUCCAGCCACUUGGCUG… 549 nt 0.4918
PCF11-AS1:20 ACUUCCGGUUUCCUUUCCCUCAGCUAUUCCAUGGCUUUUCGUGUGGACA… 498 nt 0.4639
PCF11-AS1:21 ACUUCCGGUUUCCUUUCCCUCAGCUAUUCCAUGGCUUUUCGUGUGGACA… 1222 nt 0.4599
PCF11-AS1:22 ACUUCCGGUUUCCUUUCCCUCAGCUAUUCCAUGGCUUUUCGUGUGGACA… 472 nt 0.4597
PCF11-AS1:23 ACUUCCGGUUUCCUUUCCCUCAGCUAUUCCAUGGCUUUUCGUGUGGACA… 546 nt 0.4890
PCF11-AS1:24 ACUUCCGGUUUCCUUUCCCUCAGCUAUUCCAUGGCUUUUCGUGUGGACA… 547 nt 0.4790
PCF11-AS1:25 UCUCAUCCACACUACCCAUUGCACCAGGUGUUGGCACCCAUACUCAGCU… 1964 nt 0.3870
PCF11-AS1:3 ACUUCCGGUUUCCUUUCCCUCAGCUAUUCCAUGGCUUUUCGUGUGGACA… 547 nt 0.4790
PCF11-AS1:4 CUUCCGGUUUCCUUUCCCUCAGCUAUUCCAUGGCUUUUCGUGUGGACAA… 876 nt 0.4452
Showing 11 to 20 of 25 entries
Summary

No relevant information is available at the moment.

Forensic Context

A study in human aortic endothelial cells demonstrated that the PCF11-AS1 was identified as a radiation-responsive long non-coding RNA, serving as a 0 Gy marker that could differentiate unirradiated samples from those exposed to X-ray doses of 1-10 Gy at the 24-hour post-radiation time point [Chopra et al. DOI:10.1038/s41598-022-24051-6].