Basic Information
Symbol
GAPLINC
RNA class
lncRNA
Alias
ENSG00000266835.1
ENSG00000266835.5
OTTHUMG00000178331.2
RP11-838N2.4
TCONS_00026238
XLOC_012611
linc-ARHGAP28-9
Location (GRCh38)
18:3466250-3486921
Forensic tag(s)
Cause of death analysis
External database
Transcripts
| ID | Sequence | Length | GC content |
|---|---|---|---|
| GAPLINC:1 | ACUUGCAGGAUCUGACACAUCCUCUUGGUUUCCUAAGUCUUAUGACUAG… | 450 nt | 0.4600 |
| GAPLINC:10 | UCUCUCUGCAAAAGGAGAAGCUGGACUCAGUUCUGUGAAGGAAGCUGCA… | 440 nt | 0.4318 |
| GAPLINC:11 | AGGUUUAAGGAAAGAAGCCAUCUCCAUAACAUAAAAGUGCAAGGUGAAG… | 323 nt | 0.4180 |
| GAPLINC:12 | GAAAUAAUGAACUCCUCCAAGGCAAGAAAUCUGUUUUGAAGCUUCUCUG… | 392 nt | 0.4617 |
| GAPLINC:13 | GAAAUAAUGAACUCCUCCAAGGCAAGAAAUCUGUUUUGAAGCUUCUCUG… | 246 nt | 0.4715 |
| GAPLINC:14 | GAAAUAAUGAACUCCUCCAAGGCAAGAAAUCUGUUUUGAAGCUUCUCUG… | 1591 nt | 0.4343 |
| GAPLINC:15 | GAAAUAAUGAACUCCUCCAAGGCAAGAAAUCUGUUUUGAAGCUUCUCUG… | 555 nt | 0.4955 |
| GAPLINC:16 | GAAAUAAUGAACUCCUCCAAGGCAAGAAAUCUGUUUUGAAGCUUCUCUG… | 1373 nt | 0.4166 |
| GAPLINC:17 | GAAAUAAUGAACUCCUCCAAGGCAAGAAAUCUGUUUUGAAGCUUCUCUG… | 632 nt | 0.4446 |
| GAPLINC:2 | ACUUGCAGGAUCUGACACAUCCUCUUGGUUUCCUAAGUCUUAUGACUAG… | 613 nt | 0.4910 |
Showing 1 to 10 of 17 entries
Summary
No relevant information is available at the moment.
Forensic Context
The literature review notes that the GAPLINC modulates the immune response during endotoxic shock [Mattick et al. DOI:10.1038/s41580-022-00566-8].