Basic Information
Symbol
PRKCQ-AS1
RNA class
lncRNA
Alias
AL158210.1
ENSG00000225948
ENSG00000225948.1
ENSG00000225948.2
ENSG00000237943
ENSG00000237943.1
ENSG00000237943.2
ENSG00000237943.6
ENSG00000259812.1
ENST00000414894.1
LOC101928150
OTTHUMG00000017622.1
OTTHUMG00000017624.1
OTTHUMG00000176125.1
RP11-554I8.1
RP11-5N23.2
RP11-5N23.3
XLOC_008370
XLOC_008371
XLOC_008372
linc-ITIH2-10
linc-ITIH2-8
linc-ITIH2-9
Location (GRCh38)
10:6580399-6639781
Forensic tag(s)
Drug abuse diagnoses
External database
Transcripts
| ID | Sequence | Length | GC content |
|---|---|---|---|
| PRKCQ-AS1:1 | CCGGCCUCCCGGGACCCGGCACCUCUAGCCAGGGACGCGCGCUCGGUCC… | 1054 nt | 0.5351 |
| PRKCQ-AS1:10 | UUGUCGCCCAGCUGCGAACUGGAGCGGGAGGCGGCGGCCGGAGGGCCCA… | 3562 nt | 0.3880 |
| PRKCQ-AS1:11 | CUGGAGCGGGAGGCGGCGGCCGGAGGGCCCAGGACAGCCCCGGGAGGGC… | 5242 nt | 0.3709 |
| PRKCQ-AS1:12 | AUUCUCAGAGUCAGGAAAAGGGGCGAGAGGCCACAUGUCUCCCUCUCGC… | 850 nt | 0.4659 |
| PRKCQ-AS1:13 | GUUCUGCCCUGAUGUUUCCUGGAAUAAUGCUGAGGACUGCCUUUCGGGU… | 365 nt | 0.4877 |
| PRKCQ-AS1:14 | CUGCCCUGAUGUUUCCUGGAAUAAUGCUGAGGACUGCCUUUCGGGUAGC… | 421 nt | 0.4846 |
| PRKCQ-AS1:15 | AGGAGGAAAUCCUAUGUGUCUGCUCCCGGAGCUGCCACAACCCAUCUUC… | 666 nt | 0.4324 |
| PRKCQ-AS1:16 | AGGAGGAAAUCCUAUGUGUCUGCUCCCGGAGCUGCCACAACCCAUCUUC… | 661 nt | 0.4085 |
| PRKCQ-AS1:17 | AGGAGGAAAUCCUAUGUGUCUGCUCCCGGAGCUGCCACAACCCAUCUUC… | 883 nt | 0.3975 |
| PRKCQ-AS1:18 | AGGAGGAAAUCCUAUGUGUCUGCUCCCGGAGCUGCCACAACCCAUCUUC… | 661 nt | 0.4327 |
Showing 1 to 10 of 57 entries
Summary
No relevant information is available at the moment.
Forensic Context
A study in human postmortem midbrain specimens from chronic cocaine abusers identified the PRKCQ-AS1 as a significantly down-regulated long noncoding RNA (-1.33-fold) in cocaine abusers compared to matched controls [Bannon et al. DOI:10.1111/jnc.13255]. A review further notes the PRKCQ-AS1 as a biomarker significantly altered in cocaine abusers, highlighting its association with drug abuse disorders [Das et al. DOI:10.1080/21655979.2021.2003667].