Basic Information
Symbol
PRKCQ-AS1
RNA class
lncRNA
Alias
AL158210.1
ENSG00000225948
ENSG00000225948.1
ENSG00000225948.2
ENSG00000237943
ENSG00000237943.1
ENSG00000237943.2
ENSG00000237943.6
ENSG00000259812.1
ENST00000414894.1
LOC101928150
OTTHUMG00000017622.1
OTTHUMG00000017624.1
OTTHUMG00000176125.1
RP11-554I8.1
RP11-5N23.2
RP11-5N23.3
XLOC_008370
XLOC_008371
XLOC_008372
linc-ITIH2-10
linc-ITIH2-8
linc-ITIH2-9
Location (GRCh38)
10:6580399-6639781
Forensic tag(s)
Drug abuse diagnoses
External database
Transcripts
| ID | Sequence | Length | GC content |
|---|---|---|---|
| PRKCQ-AS1:19 | AGGAGGAAAUCCUAUGUGUCUGCUCCCGGAGCUGCCACAACCCAUCUUC… | 401 nt | 0.4364 |
| PRKCQ-AS1:2 | CCGGCCUCCCGGGACCCGGCACCUCUAGCCAGGGACGCGCGCUCGGUCC… | 918 nt | 0.5545 |
| PRKCQ-AS1:20 | AAAUCCUAUGUGUCUGCUCCCGGAGCUGCCACAACCCAUCUUCCCACAA… | 905 nt | 0.4133 |
| PRKCQ-AS1:21 | CGGAGCUGCCACAACCCAUCUUCCCACAACUCGGAACUUGGAAAAAGGA… | 767 nt | 0.4068 |
| PRKCQ-AS1:22 | CGGAGCUGCCACAACCCAUCUUCCCACAACUCGGAACUUGGAAAAAGGA… | 1132 nt | 0.4337 |
| PRKCQ-AS1:23 | CGGAGCUGCCACAACCCAUCUUCCCACAACUCGGAACUUGGAAAAAGGA… | 811 nt | 0.4328 |
| PRKCQ-AS1:24 | UCGGAACUUGGAAAAAGGAACCCAGGACACGACUUUGCUUUUCUUUUGG… | 757 nt | 0.4293 |
| PRKCQ-AS1:25 | AUUUUACAGAAAGUAUGCUGGGCUACACAGGAUAUUCUAUCAGGUUUCU… | 880 nt | 0.3705 |
| PRKCQ-AS1:26 | GCUAUAAAAUUCUGAGACUAAAUAUCAAAUUAAAGAAAGUACUAAUUGU… | 697 nt | 0.4017 |
| PRKCQ-AS1:27 | GAAAAUCUUCCUAAACUGCUGGAGGAUACACCUCUGAUAGCUUGAGACA… | 327 nt | 0.4006 |
Showing 11 to 20 of 57 entries
Summary
No relevant information is available at the moment.
Forensic Context
A study in human postmortem midbrain specimens from chronic cocaine abusers identified the PRKCQ-AS1 as a significantly down-regulated long noncoding RNA (-1.33-fold) in cocaine abusers compared to matched controls [Bannon et al. DOI:10.1111/jnc.13255]. A review further notes the PRKCQ-AS1 as a biomarker significantly altered in cocaine abusers, highlighting its association with drug abuse disorders [Das et al. DOI:10.1080/21655979.2021.2003667].