Basic Information
Symbol
PRKCQ-AS1
RNA class
lncRNA
Alias
AL158210.1
ENSG00000225948
ENSG00000225948.1
ENSG00000225948.2
ENSG00000237943
ENSG00000237943.1
ENSG00000237943.2
ENSG00000237943.6
ENSG00000259812.1
ENST00000414894.1
LOC101928150
OTTHUMG00000017622.1
OTTHUMG00000017624.1
OTTHUMG00000176125.1
RP11-554I8.1
RP11-5N23.2
RP11-5N23.3
XLOC_008370
XLOC_008371
XLOC_008372
linc-ITIH2-10
linc-ITIH2-8
linc-ITIH2-9
Location (GRCh38)
10:6580399-6639781
Forensic tag(s)
Drug abuse diagnoses
External database
Transcripts
| ID | Sequence | Length | GC content |
|---|---|---|---|
| PRKCQ-AS1:28 | UUCCUAAACUGCUGGAGGAUACACCUCUGAUAGCUUGAGACAAAUAUCC… | 300 nt | 0.4267 |
| PRKCQ-AS1:29 | GAAUCACUCAAGAGGGGAGCAAAGCUCAGGAAAUGAGAUCAGCCCAGUC… | 378 nt | 0.3915 |
| PRKCQ-AS1:3 | ACCUCUAGCCAGGGACGCGCGCUCGGUCCCCCGCCGUGCGCCCCCGGUC… | 1133 nt | 0.5154 |
| PRKCQ-AS1:30 | GAGAUCAGCCCAGUCUCCAUGUGAUGAAGCAGAUCACAGAUCCUCCCCG… | 531 nt | 0.4068 |
| PRKCQ-AS1:31 | GAAAGAAUAUUGAUUGAACAUCUACUCAAGAACUGCAAAACAGAGAUUA… | 938 nt | 0.3891 |
| PRKCQ-AS1:32 | AGAACUGCAAAACAGAGAUUACCUGACCUAAAGCAUUUAUAUUGCCAAU… | 587 nt | 0.3612 |
| PRKCQ-AS1:33 | UUGGUAUCACAUUACGGAUAAACCCCAGUUUUUGAACUUCACAUACUGC… | 1504 nt | 0.3916 |
| PRKCQ-AS1:34 | UUGGUAUCACAUUACGGAUAAACCCCAGUUUUUGAACUUCACAUACUGC… | 559 nt | 0.4222 |
| PRKCQ-AS1:35 | GCUAUAGUGCCCAUGGAAAGACUCUAGUCUGAAGAUACCAGUCUCUCCC… | 680 nt | 0.3971 |
| PRKCQ-AS1:36 | ACCUCUAGCCAGGGACGCGCGCUCGGUCCCCCGCCGUGCGCCCCCGGUC… | 1133 nt | 0.5154 |
Showing 21 to 30 of 57 entries
Summary
No relevant information is available at the moment.
Forensic Context
A study in human postmortem midbrain specimens from chronic cocaine abusers identified the PRKCQ-AS1 as a significantly down-regulated long noncoding RNA (-1.33-fold) in cocaine abusers compared to matched controls [Bannon et al. DOI:10.1111/jnc.13255]. A review further notes the PRKCQ-AS1 as a biomarker significantly altered in cocaine abusers, highlighting its association with drug abuse disorders [Das et al. DOI:10.1080/21655979.2021.2003667].