Basic Information
Symbol
PRKCQ-AS1
RNA class
lncRNA
Alias
AL158210.1
ENSG00000225948
ENSG00000225948.1
ENSG00000225948.2
ENSG00000237943
ENSG00000237943.1
ENSG00000237943.2
ENSG00000237943.6
ENSG00000259812.1
ENST00000414894.1
LOC101928150
OTTHUMG00000017622.1
OTTHUMG00000017624.1
OTTHUMG00000176125.1
RP11-554I8.1
RP11-5N23.2
RP11-5N23.3
XLOC_008370
XLOC_008371
XLOC_008372
linc-ITIH2-10
linc-ITIH2-8
linc-ITIH2-9
Location (GRCh38)
10:6580399-6639781
Forensic tag(s)
Drug abuse diagnoses
External database
Transcripts
| ID | Sequence | Length | GC content |
|---|---|---|---|
| PRKCQ-AS1:37 | ACCUCUAGCCAGGGACGCGCGCUCGGUCCCCCGCCGUGCGCCCCCGGUC… | 8613 nt | 0.3900 |
| PRKCQ-AS1:38 | ACCUCUAGCCAGGGACGCGCGCUCGGUCCCCCGCCGUGCGCCCCCGGUC… | 11636 nt | 0.3966 |
| PRKCQ-AS1:39 | ACCUCUAGCCAGGGACGCGCGCUCGGUCCCCCGCCGUGCGCCCCCGGUC… | 926 nt | 0.5421 |
| PRKCQ-AS1:4 | AGCCAGGGACGCGCGCUCGGUCCCCCGCCGUGCGCCCCCGGUCCCGCGC… | 2189 nt | 0.4203 |
| PRKCQ-AS1:40 | ACCUCUAGCCAGGGACGCGCGCUCGGUCCCCCGCCGUGCGCCCCCGGUC… | 7324 nt | 0.3889 |
| PRKCQ-AS1:41 | ACUUGUCGCCCAGCUGCGAACUGGAGCGGGAGGCGGCGGCCGGAGGGCC… | 5472 nt | 0.4075 |
| PRKCQ-AS1:42 | ACUUGUCGCCCAGCUGCGAACUGGAGCGGGAGGCGGCGGCCGGAGGGCC… | 556 nt | 0.5486 |
| PRKCQ-AS1:43 | ACUUGUCGCCCAGCUGCGAACUGGAGCGGGAGGCGGCGGCCGGAGGGCC… | 781 nt | 0.5339 |
| PRKCQ-AS1:44 | ACUUGUCGCCCAGCUGCGAACUGGAGCGGGAGGCGGCGGCCGGAGGGCC… | 2931 nt | 0.3965 |
| PRKCQ-AS1:45 | ACUUGUCGCCCAGCUGCGAACUGGAGCGGGAGGCGGCGGCCGGAGGGCC… | 4682 nt | 0.4052 |
Showing 31 to 40 of 57 entries
Summary
No relevant information is available at the moment.
Forensic Context
A study in human postmortem midbrain specimens from chronic cocaine abusers identified the PRKCQ-AS1 as a significantly down-regulated long noncoding RNA (-1.33-fold) in cocaine abusers compared to matched controls [Bannon et al. DOI:10.1111/jnc.13255]. A review further notes the PRKCQ-AS1 as a biomarker significantly altered in cocaine abusers, highlighting its association with drug abuse disorders [Das et al. DOI:10.1080/21655979.2021.2003667].