Basic Information
Symbol
PRKCQ-AS1
RNA class
lncRNA
Alias
AL158210.1
ENSG00000225948
ENSG00000225948.1
ENSG00000225948.2
ENSG00000237943
ENSG00000237943.1
ENSG00000237943.2
ENSG00000237943.6
ENSG00000259812.1
ENST00000414894.1
LOC101928150
OTTHUMG00000017622.1
OTTHUMG00000017624.1
OTTHUMG00000176125.1
RP11-554I8.1
RP11-5N23.2
RP11-5N23.3
XLOC_008370
XLOC_008371
XLOC_008372
linc-ITIH2-10
linc-ITIH2-8
linc-ITIH2-9
Location (GRCh38)
10:6580399-6639781
Forensic tag(s)
Drug abuse diagnoses
External database
Transcripts
| ID | Sequence | Length | GC content |
|---|---|---|---|
| PRKCQ-AS1:46 | ACUUCUUUUCCUCUUUCAGGUUCUGCCCUGAUGUUUCCUGGAAUAAUGC… | 443 nt | 0.4786 |
| PRKCQ-AS1:47 | ACUUCUUUUCCUCUUUCAGGUUCUGCCCUGAUGUUUCCUGGAAUAAUGC… | 384 nt | 0.4818 |
| PRKCQ-AS1:48 | ACUUCUUUUCCUCUUUCAGGUUCUGCCCUGAUGUUUCCUGGAAUAAUGC… | 809 nt | 0.4302 |
| PRKCQ-AS1:49 | ACUUCUUUUCCUCUUUCAGGUUCUGCCCUGAUGUUUCCUGGAAUAAUGC… | 814 nt | 0.4496 |
| PRKCQ-AS1:5 | AGCCAGGGACGCGCGCUCGGUCCCCCGCCGUGCGCCCCCGGUCCCGCGC… | 920 nt | 0.5424 |
| PRKCQ-AS1:50 | CACUGCUUGGUGGUGAGAAGAAACUCCCACACCUUUGGUCACAGAAGUC… | 638 nt | 0.3887 |
| PRKCQ-AS1:51 | GGAGAAGCCUGGUUUGAGUGAGUUUUUCCUGAAGCAAAAGGGAAGAGCU… | 499 nt | 0.3808 |
| PRKCQ-AS1:52 | GGAGAAGCCUGGUUUGAGUGAGUUUUUCCUGAAGCAAAAGGGAAGAGCU… | 500 nt | 0.3820 |
| PRKCQ-AS1:53 | GGAGAAGCCUGGUUUGAGUGAGUUUUUCCUGAAGCAAAAGGGAAGAGCU… | 3470 nt | 0.4153 |
| PRKCQ-AS1:54 | UUAUUUAGUAUGGUAACUUGCUUCUUGAUUUUACAAAUAUGAAUUCUCU… | 1012 nt | 0.3864 |
Showing 41 to 50 of 57 entries
Summary
No relevant information is available at the moment.
Forensic Context
A study in human postmortem midbrain specimens from chronic cocaine abusers identified the PRKCQ-AS1 as a significantly down-regulated long noncoding RNA (-1.33-fold) in cocaine abusers compared to matched controls [Bannon et al. DOI:10.1111/jnc.13255]. A review further notes the PRKCQ-AS1 as a biomarker significantly altered in cocaine abusers, highlighting its association with drug abuse disorders [Das et al. DOI:10.1080/21655979.2021.2003667].