Basic Information

Symbol
GAS5
RNA class
lncRNA
Alias
ENSG00000234741 ENSG00000234741.2 ENSG00000234741.3 ENSG00000234741.7 NCRNA00030 OTTHUMG00000037216.2 SNHG2
Location (GRCh38)
Forensic tag(s)
Sudden cardiac death diagnosis Other applications

Transcripts

ID Sequence Length GC content
GAS5:19 UUUCGAGGUAGGAGUCGACUCCUGUGAGGUAUGGUGCUGGGUGCAGAUG… 595 nt 0.4487
GAS5:2 AGGGGGAGGAGCCGAAGCGGACGCUGCCGGGAGCGUGCGUCGUGACGUC… 8718 nt 0.4308
GAS5:20 GAGGUAGGAGUCGACUCCUGUGAGGUAUGGUGCUGGGUGCAGAUGCAGU… 483 nt 0.4638
GAS5:21 GGGGGAUUGCACAUAUGGUGCAUGCGUGACCUAAGCUGCGACUAUGUUA… 1302 nt 0.4908
GAS5:22 AUGGUGCAUGCGUGACCUAAGCUGCGACUAUGUUAGAGUAGAACUGCGG… 688 nt 0.4680
GAS5:23 CUGUGUUGGUAGGGACAUCUGAGAGUAAUGAUGAAUGCCAACCGCUCUG… 796 nt 0.5163
GAS5:24 CUGUGUUGGUAGGGACAUCUGAGAGUAAUGAUGAAUGCCAACCGCUCUG… 1007 nt 0.5035
GAS5:25 CUGUGUUGGUAGGGACAUCUGAGAGUAAUGAUGAAUGCCAACCGCUCUG… 1225 nt 0.4841
GAS5:26 CUGUGUUGGUAGGGACAUCUGAGAGUAAUGAUGAAUGCCAACCGCUCUG… 1241 nt 0.4819
GAS5:27 CUGUGUUGGUAGGGACAUCUGAGAGUAAUGAUGAAUGCCAACCGCUCUG… 1264 nt 0.4810
Showing 11 to 20 of 83 entries
Summary

This gene produces a spliced long non-coding RNA and is a member of the 5' terminal oligo-pyrimidine class of genes. It is a small nucleolar RNA host gene, containing multiple C/D box snoRNA genes in its introns. Part of the secondary RNA structure of the encoded transcript mimics glucocorticoid response element (GRE) which means it can bind to the DNA binding domain of the glucocorticoid receptor (nuclear receptor subfamily 3, group C, member 1). This action blocks the glucocorticoid receptor from being activated and thereby stops it from regulating the transcription of its target genes. This transcript is also thought to regulate the transcriptional activity of other receptors, such as androgen, progesterone and mineralocorticoid receptors, that can bind to its GRE mimic region. Multiple functions have been associated with this transcript, including cellular growth arrest and apoptosis. It has also been identified as a potential tumor suppressor, with its down-regulation associated with cancer in multiple different tissues. [provided by RefSeq, Mar 2015]

Forensic Context

A study in mice demonstrated that the GAS5 is upregulated in arterial plaques but downregulated in the plasma of coronary artery disease patients, where it modulates macrophage and endothelial cell apoptosis following ox-LDL stimulation [Chih-Fan Yeh et al. DOI:10.1186/s12929-020-00647-w]. In human cervical and ovarian granulosa tumor models, overexpression of the GAS5 enhances radiosensitivity by sponging miR-106b to upregulate IER3 and sponging miR-205-5p to regulate the Wnt/β-catenin pathway and apoptosis [May et al. DOI:10.1016/j.trsl.2021.02.005].