Basic Information

Symbol
GAS5
RNA class
lncRNA
Alias
ENSG00000234741 ENSG00000234741.2 ENSG00000234741.3 ENSG00000234741.7 NCRNA00030 OTTHUMG00000037216.2 SNHG2
Location (GRCh38)
Forensic tag(s)
Sudden cardiac death diagnosis Other applications

Transcripts

ID Sequence Length GC content
GAS5:37 UGGUGCUGGGUGCAGAUGCAGUGUGGCUCUGGAUAGCACCUUAUGGACA… 242 nt 0.4835
GAS5:38 UGCAGAUGCAGUGUGGCUCUGGAUAGCACCUUAUGGACAGUUGUGUCCC… 497 nt 0.4125
GAS5:39 GCAUUAGACAGAAAGCUGGAAGUUGAAAUGGUGGAGUCCAACUUGCCUG… 413 nt 0.4455
GAS5:4 GUCUUUUCGAGGUAGGAGUCGACUCCUGUGAGUUAGGUAUGGUGCUGGG… 660 nt 0.4576
GAS5:40 GAUACAAUGAUGAUAACAUAGUUCAGCAGACUAACGCUGAUGAGCAAUA… 643 nt 0.3857
GAS5:41 AUACAAUGAUGAUAACAUAGUUCAGCAGACUAACGCUGAUGAGCAAUAU… 424 nt 0.4222
GAS5:42 AAUGAUGAUAACAUAGUUCAGCAGACUAACGCUGAUGAGCAAUAUUAAG… 575 nt 0.3930
GAS5:43 GCUGAUGAGCAAUAUUAAGUCUUUCGCUCCUAUCUGAUGUAUCUGGCGG… 621 nt 0.3977
GAS5:44 GUUUGCUCUUUCCGGCAAUUCCCCAGUGAGGAAGCCCCUGGAGGAAAGU… 5852 nt 0.4305
GAS5:45 GUUUGCUCUUUCCGGCAAUUCCCCAGUGAGGAAGCCCCUGGAGGAAAGU… 915 nt 0.5126
Showing 31 to 40 of 83 entries
Summary

This gene produces a spliced long non-coding RNA and is a member of the 5' terminal oligo-pyrimidine class of genes. It is a small nucleolar RNA host gene, containing multiple C/D box snoRNA genes in its introns. Part of the secondary RNA structure of the encoded transcript mimics glucocorticoid response element (GRE) which means it can bind to the DNA binding domain of the glucocorticoid receptor (nuclear receptor subfamily 3, group C, member 1). This action blocks the glucocorticoid receptor from being activated and thereby stops it from regulating the transcription of its target genes. This transcript is also thought to regulate the transcriptional activity of other receptors, such as androgen, progesterone and mineralocorticoid receptors, that can bind to its GRE mimic region. Multiple functions have been associated with this transcript, including cellular growth arrest and apoptosis. It has also been identified as a potential tumor suppressor, with its down-regulation associated with cancer in multiple different tissues. [provided by RefSeq, Mar 2015]

Forensic Context

A study in mice demonstrated that the GAS5 is upregulated in arterial plaques but downregulated in the plasma of coronary artery disease patients, where it modulates macrophage and endothelial cell apoptosis following ox-LDL stimulation [Chih-Fan Yeh et al. DOI:10.1186/s12929-020-00647-w]. In human cervical and ovarian granulosa tumor models, overexpression of the GAS5 enhances radiosensitivity by sponging miR-106b to upregulate IER3 and sponging miR-205-5p to regulate the Wnt/β-catenin pathway and apoptosis [May et al. DOI:10.1016/j.trsl.2021.02.005].