Basic Information
Symbol
SNHG11
RNA class
lncRNA
Alias
ENSG00000174365
ENSG00000174365.14
ENSG00000174365.15
ENSG00000174365.19
LINC00101
OTTHUMG00000032449.1
XLOC_013520
linc-RALGAPB
Location (GRCh38)
20:38446578-38450925
Forensic tag(s)
Sudden death from CNS diseases
Postmortem interval inference
Transcripts
| ID | Sequence | Length | GC content |
|---|---|---|---|
| SNHG11:19 | CAGCCAGCGCCCCCAUUUUUCCUGCAGCACCCUGAUCUGCACUCCCUGA… | 741 nt | 0.5425 |
| SNHG11:2 | GCAGCCGCGCCCCCAGCCGUAUUUCCGCGGGCGCUGAGCACUAGAGAGA… | 2652 nt | 0.5547 |
| SNHG11:20 | CUCCAGGCAGCUCACUUUGGCCUCUGUUCCUGGAUCCCCUUUGCUCUUU… | 634 nt | 0.5410 |
| SNHG11:21 | CUCUUUUCUGCGCCUGCAUUCAUAGUCCACUGUGUGCAGAGGCAUGGGA… | 665 nt | 0.5368 |
| SNHG11:22 | CGCCUGCAUUCGUAAGUGAUCACGGGCUGCCCGUGUCCUGGUCAUUGGU… | 1422 nt | 0.5021 |
| SNHG11:23 | UGCGAGCAGGGACAAGCUGGGUGCUCACUCAUGGCAUCUUAUCUGUUGC… | 621 nt | 0.5395 |
| SNHG11:24 | ACUAGAUGGUGGAGAAAGCCUGUGUGAAUUAUUUUUAAUGAAUAAGUGU… | 1186 nt | 0.5076 |
| SNHG11:25 | GUAUUUCCGCGGGCGCUGAGCACUAGAGAGAGCGUCUUGUGGCUGCGGC… | 1034 nt | 0.6122 |
| SNHG11:26 | GUAUUUCCGCGGGCGCUGAGCACUAGAGAGAGCGUCUUGUGGCUGCGGC… | 600 nt | 0.5917 |
| SNHG11:27 | GUAUUUCCGCGGGCGCUGAGCACUAGAGAGAGCGUCUUGUGGCUGCGGC… | 758 nt | 0.6332 |
Showing 11 to 20 of 38 entries
Summary
This gene is a member of the non-protein-coding multiple snoRNA host gene family. Two snoRNAs are derived from the introns of this host gene. Although many alternative splice variants have been observed, the gene is thought to have no protein-coding potential. [provided by RefSeq, Jul 2008]
Forensic Context
A study in mice demonstrated that the long non-coding RNA Snhg11, which is highly expressed in ischemic stroke brain, was upregulated in post-mortem interval (PMI)-dependent oligodendrocyte-specific differentially expressed genes [Guo et al. DOI:10.1016/j.ijbiomac.2025.147708].