Basic Information
Symbol
CASC15
RNA class
lncRNA
Alias
AL359694.2
ENSG00000238274
ENSG00000238274.2
ENSG00000260049.1
ENSG00000261568.1
ENSG00000272168.1
ENSG00000272168.5
ENSG00000272168.6
LINC00340
OTTHUMG00000014345.1
OTTHUMG00000173107.2
OTTHUMG00000175903.1
RP1-67M12.1
RP11-524C21.2
RP3-404K8.2
XLOC_005198
linc-HDGFL1-1
lnc-SOX4-1
Location (GRCh38)
6:21664220-22517711
Forensic tag(s)
-
Transcripts
| ID | Sequence | Length | GC content |
|---|---|---|---|
| CASC15:1 | GUUGGUUGUAAAGUUUCCGAGAGCGGCGUGGGCUGGUGCGAGUGAAGCG… | 1226 nt | 0.4902 |
| CASC15:10 | GCCUCUGCCUUCCAAAGUGCUGGGAUUACAGGCAUGCACCACCACACCC… | 3322 nt | 0.3802 |
| CASC15:11 | ACUUGAGCAAAGCAAUAGUCACCCACAAGUAUUCAGCCUAUCUUGUCUU… | 930 nt | 0.4785 |
| CASC15:12 | GGGUAAAGCAAAGUCUUCAAGGGAAGAUAACAAAGGAUGAAACAAUGGU… | 1498 nt | 0.4733 |
| CASC15:13 | GGGUAAAGCAAAGUCUUCAAGGGAAGAUAACAAAGGAUGAAACAAUGGU… | 1497 nt | 0.4736 |
| CASC15:14 | GAUGUCCUCUGCAGAUUUAAAAUGUGUGCCUUCUUUUCCGUCACCAAGU… | 712 nt | 0.5014 |
| CASC15:15 | GAUGUCCUCUGCAGAUUUAAAAUGUGUGCCUUCUUUUCCGUCACCAAGU… | 548 nt | 0.5182 |
| CASC15:16 | GAGCUGUGGAGUCCAAGUGUGACUGCCAAGAGGAAUCCAGCAAAGCCAA… | 327 nt | 0.4954 |
| CASC15:17 | UGAAGCCAGACCGUCUUUCCUCACAGCUCCACGGCUGCAUCUCCGUGGG… | 721 nt | 0.5881 |
| CASC15:18 | GGGCACGCAAGCUUCCCCUGGUUACCUGAGCUGCUCCUGCCGUCUCCCG… | 3969 nt | 0.4248 |
Showing 1 to 10 of 75 entries
Summary
This gene produces a long non-coding RNA that may regulate cell proliferation. This RNA is upregulated in hepatocellular carcinoma, where it is thought to function as an oncogene. However, some splice variants of this gene may function as a tumor suppressor in neuroblastoma and other tumor types. Circular RNA variants were observed at this gene. [provided by RefSeq, Dec 2017]
Forensic Context
No relevant information is available at the moment.