Basic Information
Symbol
CASC15
RNA class
lncRNA
Alias
AL359694.2
ENSG00000238274
ENSG00000238274.2
ENSG00000260049.1
ENSG00000261568.1
ENSG00000272168.1
ENSG00000272168.5
ENSG00000272168.6
LINC00340
OTTHUMG00000014345.1
OTTHUMG00000173107.2
OTTHUMG00000175903.1
RP1-67M12.1
RP11-524C21.2
RP3-404K8.2
XLOC_005198
linc-HDGFL1-1
lnc-SOX4-1
Location (GRCh38)
6:21664220-22517711
Forensic tag(s)
-
Transcripts
| ID | Sequence | Length | GC content |
|---|---|---|---|
| CASC15:19 | UUUAUAACCCAGCACAUGGAUAGAGGAACUGUAAAUUGUAGUCUGGAUG… | 4461 nt | 0.3921 |
| CASC15:2 | GUUGGUUGUAAAGUUUCCGAGAGCGGCGUGGGCUGGUGCGAGUGAAGCG… | 1288 nt | 0.4852 |
| CASC15:20 | UACACAGUAGCAAGAUUCUUGAAUCAUAUAGUAAUUCUAUUUUUAGCUU… | 1365 nt | 0.3604 |
| CASC15:21 | GUGGUUUUGAUUUGCAUUUUCCUGAUGUUAUUUUUUUAAUAUACUUGUG… | 327 nt | 0.3180 |
| CASC15:22 | UCACGCUGGGAGCUGUAGACUGGAGCUGUUCCUAUUCGGCCAUCUUGGC… | 6526 nt | 0.3690 |
| CASC15:23 | CAAGAACACUGUAUGUUUUUUCCUUGCAUUAGGAAAUGGGGAUAAUUUU… | 3882 nt | 0.4127 |
| CASC15:24 | CAAGAACACUGUAUGUUUUUUCCUUGCAUUAGGAAAUGGGGAUAAUUUU… | 3882 nt | 0.4189 |
| CASC15:25 | GGAGACCAGAAGGCCAAAAUCAAAAGUAUGGGCAGGCUUGAUUUCUUUA… | 562 nt | 0.4181 |
| CASC15:26 | UGCAUGUAAGUGGCAAAGAUGACUGUCUGAAAAUAUAUACCUACUUUUU… | 453 nt | 0.3951 |
| CASC15:27 | AUAGUAGUAAACCUUUUUCUGACCUUAUUUAAACCUAUCAACAGUCUCA… | 5813 nt | 0.3755 |
Showing 11 to 20 of 75 entries
Summary
This gene produces a long non-coding RNA that may regulate cell proliferation. This RNA is upregulated in hepatocellular carcinoma, where it is thought to function as an oncogene. However, some splice variants of this gene may function as a tumor suppressor in neuroblastoma and other tumor types. Circular RNA variants were observed at this gene. [provided by RefSeq, Dec 2017]
Forensic Context
No relevant information is available at the moment.