Basic Information
Symbol
CASC15
RNA class
lncRNA
Alias
AL359694.2
ENSG00000238274
ENSG00000238274.2
ENSG00000260049.1
ENSG00000261568.1
ENSG00000272168.1
ENSG00000272168.5
ENSG00000272168.6
LINC00340
OTTHUMG00000014345.1
OTTHUMG00000173107.2
OTTHUMG00000175903.1
RP1-67M12.1
RP11-524C21.2
RP3-404K8.2
XLOC_005198
linc-HDGFL1-1
lnc-SOX4-1
Location (GRCh38)
6:21664220-22517711
Forensic tag(s)
-
Transcripts
| ID | Sequence | Length | GC content |
|---|---|---|---|
| CASC15:37 | AGUAGGCGACUGACUGCCCAAGAGACCCAGGGCUCCGCAAGGAGACGGC… | 2494 nt | 0.4178 |
| CASC15:38 | AGUAGGCGACUGACUGCCCAAGAGACCCAGGGCUCCGCAAGGAGACGGC… | 10217 nt | 0.3990 |
| CASC15:39 | GAGUUGUUCUGUGUAUUGGGUGGAGGAGGGUGAAUCCGAGAGGAGGGAG… | 460 nt | 0.5804 |
| CASC15:4 | GUCUGCUCCGGGACUUGGAACAAAAGGGGGAACUCUGAUGAACUCUCUU… | 994 nt | 0.4527 |
| CASC15:40 | GAGUUGUUCUGUGUAUUGGGUGGAGGAGGGUGAAUCCGAGAGGAGGGAG… | 672 nt | 0.4524 |
| CASC15:41 | GAGUUGUUCUGUGUAUUGGGUGGAGGAGGGUGAAUCCGAGAGGAGGGAG… | 946 nt | 0.4503 |
| CASC15:42 | GUCUGCUCCGGGACUUGGAACAAAAGGGGGAACUCUGAUGAACUCUCUU… | 1115 nt | 0.4493 |
| CASC15:43 | GUCUGCUCCGGGACUUGGAACAAAAGGGGGAACUCUGAUGAACUCUCUU… | 1789 nt | 0.4667 |
| CASC15:44 | GUCUGCUCCGGGACUUGGAACAAAAGGGGGAACUCUGAUGAACUCUCUU… | 1889 nt | 0.4537 |
| CASC15:45 | GUCUGCUCCGGGACUUGGAACAAAAGGGGGAACUCUGAUGAACUCUCUU… | 15632 nt | 0.3995 |
Showing 31 to 40 of 75 entries
Summary
This gene produces a long non-coding RNA that may regulate cell proliferation. This RNA is upregulated in hepatocellular carcinoma, where it is thought to function as an oncogene. However, some splice variants of this gene may function as a tumor suppressor in neuroblastoma and other tumor types. Circular RNA variants were observed at this gene. [provided by RefSeq, Dec 2017]
Forensic Context
No relevant information is available at the moment.