Basic Information
Symbol
CASC15
RNA class
lncRNA
Alias
AL359694.2
ENSG00000238274
ENSG00000238274.2
ENSG00000260049.1
ENSG00000261568.1
ENSG00000272168.1
ENSG00000272168.5
ENSG00000272168.6
LINC00340
OTTHUMG00000014345.1
OTTHUMG00000173107.2
OTTHUMG00000175903.1
RP1-67M12.1
RP11-524C21.2
RP3-404K8.2
XLOC_005198
linc-HDGFL1-1
lnc-SOX4-1
Location (GRCh38)
6:21664220-22517711
Forensic tag(s)
-
Transcripts
| ID | Sequence | Length | GC content |
|---|---|---|---|
| CASC15:46 | GUCUGCUCCGGGACUUGGAACAAAAGGGGGAACUCUGAUGAACUCUCUU… | 15541 nt | 0.3997 |
| CASC15:47 | GUCUGCUCCGGGACUUGGAACAAAAGGGGGAACUCUGAUGAACUCUCUU… | 16522 nt | 0.3995 |
| CASC15:48 | ACAGAGACACUCAGAAGGAAUUGGGACUGGAUGUGGAGGAAAGACAUCA… | 1770 nt | 0.3966 |
| CASC15:49 | ACAGAGACACUCAGAAGGAAUUGGGACUGGAUGUGGAGGAAAGACAUCA… | 905 nt | 0.4453 |
| CASC15:5 | GUCUGCUCCGGGACUUGGAACAAAAGGGGGAACUCUGAUGAACUCUCUU… | 1889 nt | 0.4537 |
| CASC15:50 | ACAGAGACACUCAGAAGGAAUUGGGACUGGAUGUGGAGGAAAGACAUCA… | 763 nt | 0.4299 |
| CASC15:51 | AAAUGCCUUGGAAGAGACCUCAGAGGAUACCAGUCCGGGUUUAGGAUGC… | 2031 nt | 0.4151 |
| CASC15:52 | ACACAUGACCUCUGUCCUUCCAGCUGCCACCAGUUUCUGGGUUGUCGAG… | 15295 nt | 0.3981 |
| CASC15:53 | ACACAUGACCUCUGUCCUUCCAGCUGCCACCAGUUUCUGGGUUGUCGAG… | 832 nt | 0.4615 |
| CASC15:54 | ACACAUGACCUCUGUCCUUCCAGCUGCCACCAGUUUCUGGGUUGUCGAG… | 924 nt | 0.4751 |
Showing 41 to 50 of 75 entries
Summary
This gene produces a long non-coding RNA that may regulate cell proliferation. This RNA is upregulated in hepatocellular carcinoma, where it is thought to function as an oncogene. However, some splice variants of this gene may function as a tumor suppressor in neuroblastoma and other tumor types. Circular RNA variants were observed at this gene. [provided by RefSeq, Dec 2017]
Forensic Context
No relevant information is available at the moment.