Basic Information
Symbol
CASC15
RNA class
lncRNA
Alias
AL359694.2
ENSG00000238274
ENSG00000238274.2
ENSG00000260049.1
ENSG00000261568.1
ENSG00000272168.1
ENSG00000272168.5
ENSG00000272168.6
LINC00340
OTTHUMG00000014345.1
OTTHUMG00000173107.2
OTTHUMG00000175903.1
RP1-67M12.1
RP11-524C21.2
RP3-404K8.2
XLOC_005198
linc-HDGFL1-1
lnc-SOX4-1
Location (GRCh38)
6:21664220-22517711
Forensic tag(s)
-
Transcripts
| ID | Sequence | Length | GC content |
|---|---|---|---|
| CASC15:64 | GUCUUUGUGACUGGCACUCAUGGACAGACAGUGGUGUUCAGGGACAGAA… | 13071 nt | 0.4082 |
| CASC15:65 | GUCUUUGUGACUGGCACUCAUGGACAGACAGUGGUGUUCAGGGACAGAA… | 13136 nt | 0.4083 |
| CASC15:66 | GUCUUUGUGACUGGCACUCAUGGACAGACAGUGGUGUUCAGGGACAGAA… | 13140 nt | 0.4083 |
| CASC15:67 | GUCUUUGUGACUGGCACUCAUGGACAGACAGUGGUGUUCAGGGACAGAA… | 15659 nt | 0.4044 |
| CASC15:68 | AAUUCUGAAGCCAGACCGUCUUUCCUCACAGCUCCACGGCUGCAUCUCC… | 1634 nt | 0.4871 |
| CASC15:69 | ACAGCUCCACGGCUGCAUCUCCGUGGGCACGCAAGCUUCCCCUGGUUAC… | 3993 nt | 0.4260 |
| CASC15:7 | GUUAAAUCAUUGGAAUUUUUGAUGAUACCUUUUCUAUAUGGAUUACAAU… | 1634 nt | 0.4498 |
| CASC15:70 | AUCGUGCGUCUGCGCCCUGCGAAAGAAGGACCUGCUGGCGGAGCUCCGG… | 824 nt | 0.5400 |
| CASC15:71 | GGGAAGGGGAAGUUAGGAAUACCUUACAUCCAAUGCCCACCCGUGCUCC… | 1449 nt | 0.4658 |
| CASC15:72 | GAACAAUCUGAUUCACACUUGGAGGAGGACACAGGAGCUGAAUCAGAUG… | 341 nt | 0.4780 |
Showing 61 to 70 of 75 entries
Summary
This gene produces a long non-coding RNA that may regulate cell proliferation. This RNA is upregulated in hepatocellular carcinoma, where it is thought to function as an oncogene. However, some splice variants of this gene may function as a tumor suppressor in neuroblastoma and other tumor types. Circular RNA variants were observed at this gene. [provided by RefSeq, Dec 2017]
Forensic Context
No relevant information is available at the moment.