Forensic RNA Knowledge Base

Sequence Details

Symbol

CERS6-AS1:10

Sequence Length

536 nt

GC Content

0.4235

UAGUGCGCAUGCUUGAGCCCACUUACCUAACACCUGAGAUCUUAUUGGGACGCUGCUGAUAACCAGUUUCAGAGACAGGGUUUCACCAUGUUGUACAGGCUAGUCUCCAACCCCUGGGCUUAAGCAAUCCUUCUGCCUCGGCCUCCCAAAGUGCUGGGAUUACAGAGAUGCUCAAGCACUGAAUUGUCUUAAGAAAACAAGUAAGGUUUUGUCACCUAUCCUAUUUCUCACUGCAAGUUGAAAAAAAUCAAAUCCAAACACCACCACCCCUUCUAUGACAACAAACGGCUGUGGAGGUAAUCUUAUUUUCCUAAGGGUAGUUUCAUGAUGACAGUGUCAAAAAAUUACUGUGGAUAAAGAAAAAAUUGUCUCAAUGAAAUAGAAUUUUUCACUGAACACAGAAACCAUCUCAAUAGUUGCUGCUCCCUGGUUUCCAGGCCACGCAACAGACAUCAAACCAGGAAGCCAAACUUUCAUGGACCUGUGUUAAGAAAAACACACAUACAUGGGCAUACUACUUUUUCCAGAAAAACGGA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-121.6 kcal/mol

Ensemble Metrics

Free Energy: -133.21

Frequency: 0.0000

Diversity: 165.36

Structure Visualization

Structure Prediction

MFE Structure Prediction

..((((.((((((((((((((........((.(((((.(.(....((((((.(((((((.........))))...))).))))))....).).).))))...))..........))))))))))).........((....)).(((((......))))).....((((((.(((.....))).((((....(((((....(((.(((......))))))....)))))....)))).((((......))))........(((.((((.((................))..)))).)))..((((....(((....((((((((..((((......))))..))))))))..)))..))))......(((.(((.(((((.......))))).)))))).......))))))....(((((((...(((((...))))).)).)))))..........((((((((.....))))).)))...((((((......)))))).....))).)))).........(((........)))

Thermodynamic Ensemble Prediction

,,((({,({((((((((((((,,..,,,.,,.,(((({({,{{,{((({(,.{{{||||,,,...}},)))).,,|}}|}}}}}}...,)}},,.,)))..,)}..........)))))))))))}.......,({{,{{{|,{{{,..||,|||||||.,...|,|||{}}},,))}}},..,((({...{((({....{,.{(((......)))),,....}}}}}.,..},,,.{(({......}}},........{((.((((.{{,.....,.........))..)))).)))..,{{{....{{{..|,((((((((..((((,....|))))..)))))))).}}}|,,|}},.....,|||,{((.(((((.......))))).))},}}}||,...,,}}}.....((((({(...(((((...))))).}}.))))).,,,......{{{||{{{.....))))},)))...((((((......))))))....,))),))}),}},.....{((........))}