Forensic RNA Knowledge Base

Sequence Details

Symbol

CERS6-AS1:14

Sequence Length

541 nt

GC Content

0.3826

AAAAAUUAACGGAGGUAGAUUAAAAAAAAAAGCCAAUGGAGAAUUUGAAAUGCAGUAGAAAUCUUGGCAGCCCACAUCUUCAGAAACAAAUGCAAACACUGGAAUCUGUGUAAUGAACCAGAAUGAAGAUGCUCAAGCACUGAAUUGUCUUAAGAAAACAAGUAAGGUUUUGUCACCUAUCCUAUUUCUCACUGCAAGUUGAAAAAAAUCAAAUCCAAACACCACCACCCCUUCUAUGACAACAAACGGCUGUGGAGGUAAUCUUAUUUUCCUAAGGGUAGUUUCAUGAUGACAGUGUCAAAAAAUUACUGUGGAUAAAGAAAAAAUUGUCUCAAUGAAAUAGAAUUUUUCACUGAACACAGAAACCAUCUCAAUAGUUGCUGCUCCCUGGUUUCCAGGCCACGCAACAGACAUCAAACCAGGAAGCCAAACUUUCAUGGACCUGUGUUAAGAAAAACACACAUACAUGGGCAUACUACUUUUUCCAGAAAAACGGAAUUAGGCAGAGAAGGAAGUGUGGGUGUACAACUGAUCCACAAGC

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-113.5 kcal/mol

Ensemble Metrics

Free Energy: -123.49

Frequency: 0.0000

Diversity: 126.79

Structure Visualization

Structure Prediction

MFE Structure Prediction

...((((.((....)).))))..........((...((((..(.(((...((((((((((((..(((....)))((((((((.............((((........))))............))))))))((.(((.((......))))).))..........((((......)))).....)))))).))))))..((((......))))......(((((..(((.((((((...........(((((((.(((((..((((....(((....((((((((..((((......))))..))))))))..)))..))))......(((.(((.(((((.......))))).))))))........))))).)))))))((((....((((((((.((...................)).))))))))....((((((....((((((......))))))....)))))).......((..((((........))))..))))))))))))..)))..))))).))).)..))))...))

Thermodynamic Ensemble Prediction

....,,,.,,,,.,||.|,|,..........||,..((((..,.(((...((((((((((((..{((....}},((((((((..........,,.((((........))))..,,........)))))))){(.(((.((......)}))}.}).......,..{(({......)))).....)))))).))))))..{{{{......)))}.,,,..(((((.,(((.((((((.((........{((((((,(((((..,{{{..,.{|{..,,((((((((,.((((,.,,,||}}}..}}}})))),||||,{|,,,.....,|||,{((.(((((.......))))).))},}}}}|...,.}})}}.}}}||||,,(({.((((((({,,.||.,..,,....,.....,}}))})),)))....,,||{{||,...((((((......))))))....)))))}....,,.((..((((........))))..)),)).))))))..))).,))))).,,,.}..)))}...,.