Forensic RNA Knowledge Base

Sequence Details

Symbol

CERS6-AS1:6

Sequence Length

417 nt

GC Content

0.4388

AUAGUGCGCAUGCUUGAGCCCACUUACCUAACACCUGAGAUCUUAUUGGGACGCUGCUGAUAACCAGUUUCAGAGACAGGGUUUCACCAUGUUGUACAGGCUAGUCUCCAACCCCUGGGCUUAAGCAAUCCUUCUGCCUCGGCCUCCCAAAGUGCUGGGAUUACAGAUACUACAGUCUAUCCAAGUUAACGUAACAUUACUUUCUCAAUGAUCACAAUGAUACUGGGAGUUGACGAGGCUUGUAACAAUCUACUGGGAUGAUGUGAGCCUUUAUUAACCUCAUCAGAGAUGCUCAAGCACUGAAUUGUCUUAAGAAAACAAGUAAGGUUUUGUCACCUAUCCUAUUUCUCACUGCAAGUUGAAAAAAAUCAAAUCCAAACACCACCACCCCUUCUAUGACAACAAACGGCUGUGGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-90.9 kcal/mol

Ensemble Metrics

Free Energy: -101.17

Frequency: 0.0000

Diversity: 121.71

Structure Visualization

Structure Prediction

MFE Structure Prediction

.((((((...((((((((((((........((.(((((.(.(....((((((.(((((((.........))))...))).))))))....).).).))))...))..........))))))))))))(((((...((((((..((((((....(((.((((...((((......)))))))).)))....(((.((((....((.....))....)))).)))))))))....))))))...............)))))....(((((((((............))))..))))).))))))..((((....(((((....(((.(((......))))))....)))))....)))).((((......)))).........((((..((..................))..))))..

Thermodynamic Ensemble Prediction

.{(((({,..((((((((((((,,..,,,.,{.,(((({({,{{,{((({(,.{{{||||,,,...}},)))).,,|}}|}}}}}}...,)}},,.,)))..,)}..........))))))))))))........((((((..((((((..,,(((.((((...((((......)))))))).}))...,(((.((((....((.....))....)))).)))))))))....)))))).,{,,...,,,|.,,{||||{,,{{{{{{{{{..|,..,,||,,,,|}},|||,,,.)))))}..{{({,.,.{(({{...,{,,|(({......))))}}.,,.}}})}.,..))}}.{(({......})},.........{{{(,,{{,.................))..))))..