Forensic RNA Knowledge Base

Sequence Details

Symbol

DNAJC27-AS1:10

Sequence Length

276 nt

GC Content

0.5435

CGCGACUGCAGUUACCGAGUUUCUAAGGCCUCGUCCCCUGACGGGAAGGCGGCGUUGGGGGGCGGCUGGGUUUACCCUUCGAGAGACGGGGCUUCGCCAUCUUUCCCAGGCUGGUCUCAAACUCCUGAGCUCAAGUGACCCUCCUGCCUUGGCCUCCCAGAGUGCUGGGAUUACAGGCAUGAGCAAUGGUGCCUGGCCCAAAAUUCAUACAUUAGCAAAAGUAGGGAGAAUAAAGUAAUGAACACUCAUUUUCCACCUUCAGCAAUAUCAACGUGG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-86.6 kcal/mol

Ensemble Metrics

Free Energy: -92.72

Frequency: 0.0000

Diversity: 82.45

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((............((((((....(((((((((....)))))).((((((((..((((((..((((((((((........(((((.((.((..............)).)).))))).......))))))).)))..))))))))))...))))(((((....)))))....(((((((.(....).))))))))))..))))))........((..(((...(((((((..(((.......))).)))))))..)))..))........)))).

Thermodynamic Ensemble Prediction

((((..,,,.......({({{{{{{(,(((,(,((((,.,,,))),.,}.}}),))))|{(({{(..((({{,{{{{{..((((((.{(,{...,.)).))))))..})).{((.({{{......)))).})}.))))))).,)))))},{|{|((((((....))))))...{((((((.(....).))))))))))...,,,,,........((..(((..,(((((({..{((.......}}).)))))))..)))..))........)))).