Forensic RNA Knowledge Base

Sequence Details

Symbol

DNAJC27-AS1:20

Sequence Length

312 nt

GC Content

0.5641

GACGUCAUCUGCAGGCCCUGGAGACGCGACUGCAGUUACCGAGUUUCUAAGGCCUCGUCCCCUGACGGGAAGGCGGCGUUGGGGGGCGGCUGGGUUUACCCUUCGAGAUCUCUGAUGGAUUUGUUGACUCCUCUGUGGGAGAAAGGCUUGGUCUACUGCAGGUGUUAACGCUAAGCCAGGCUGGAGCUGUGGACGUCAGUUUCCUCAGCUCCCCGCUGUUCGCUUCGAACGUGACCUCGACGUCUGCUCUCCCCUUCCCUUUAGCUGACAAUGUGACAGUGCUUGAAUAAAAGUCAGUCUGACAGGAACGGU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-114.7 kcal/mol

Ensemble Metrics

Free Energy: -120.89

Frequency: 0.0000

Diversity: 85.13

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((....((.(((..((..(((((..(((((((.(((((((((....((((..(((((((((((.........)))))))))))))))(((....))).((((.(..(((...)))..).))))(((((....)))))..)))))))))..))))))))))))..))....)))..)).(((((((.(((........))).))))))).(((.(((((...)))))))).....)))))).......((.((((..(((((((((.......................))))).))))..)))).)).

Thermodynamic Ensemble Prediction

{{((((,...{{(((((.(((((((.((.,.,..,,...}}.))))))}.))))},||{{{{|||||,{,.,,{,,||||||||}||||..(((....))).,{{{,{(((({.,,|||,,,.,,,,{{{{|,,,,})))),..{{({{{{|..|,,||,},,},...}))},,)))}})),(((((((.(((........))).))))))),|||,(((((...)))))}}}.,}}})))))).,,,.,,|({((((..(((((((((..,,{..,,....,)}.,},...))))).))))..)))).)).