Forensic RNA Knowledge Base

Sequence Details

Symbol

GAS5:68

Sequence Length

319 nt

GC Content

0.5329

CUUUUCGAGGUAGGAGUCGACUCCUGUGAGGUAUGUUUUAUCUUUGCGAAUGUUGCGGGUUUUGGGGCGCUCCAGCCUUUGUCUGCUAAGGUCACCCUGAAUUGACUGGGACUUCUAAGCCAGUCGCGCGCCUUUGCAGGGCCUACAAGUUGAGGAUGGUGGGGGAUUGCACAUAUGGUGCAUGCGUGACCUAAGCUGCGACUAUGUUAGAGUAGAACUGCGGAGAAGCCUCGGCUCUCGUGCCCUGCCUCUGAUGAAGCCUGUGUUGGUAGGGACAUCUGAGAGUAAUGAUGAAUGCCAACCGCUCUGAUGGUGGCAC

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-107.6 kcal/mol

Ensemble Metrics

Free Energy: -114.91

Frequency: 0.0000

Diversity: 85.27

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((((((((((....)))))..((((((.....))))))((((......(((((....(((((......)))))..)))))..(((....)))....(((((((..........))))))))))).((((((((..(((((((((((((...(((.(.(.((.((((.....)))))).).).)))....)).))))).)).)))....)..))))))))..))))))((((((((((((((((..................))))))).)))..)))))).........(((((.(((......)))))))).

Thermodynamic Ensemble Prediction

.....(((((((((((....))))),.,{{(((.{,,,||}|||{({{...{{{((({{,,,,(((({{,,,,.|||,|..,|.||{.{((|,.||||,...,((((((..........))))))},{|||(,{{(({{.,{{(((,|||{||,},.|||,|}|.,,{((((.....))))),.)}),))),,}.))}))))}.)),,)),)}}),,)))),,,,..))))))((((((((((((((((......,...........))))))).))}..)))))).........((((,,(({......}))))))).