Sequence Details

BLAST PRIMER
Symbol
GAS5:78
Sequence Length
413 nt
GC Content
0.3753
CACAAUGAUGACAGUUUAUUUGCUACUCUUGAGUGCUAGAAUGAUGAGGAUCUUAACCACCAUUAUCUUAACUGAGGCACCCAAAAUGGUGAGUUGGGGAACAUAGAGAGUACACCUAAGUUCACAUGAAGUUGUUUCUUCCCAGGUCCUAAAGAGCAAGCCUAACUCAAGCCAUUGGCACACAGGUGAGACACCUCUAUUUUGUACUUCUCACUUUUAAGGGAUUAGAAAAUAGCCAAAGCAAUGAUGAUUAUCUAUGUUAGUGCUUCUCUCCCCUCUUUUCAAAUGAGAAUUUUGCUCUCAUAUUGAUACUAAGUUUAAUACUGAAGAAAAUGUGAAAACAGAUACUAUGAUGGUUGCAUAGUUCAGCAGAUUUAAUCAUGAAGAGAUGUACUAUCUGUCUGAUGUAUCUG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-89 kcal/mol
Ensemble Metrics
Free Energy: -97.62
Frequency: 0.0000
Diversity: 156.75
Structure Visualization
Structure Prediction
MFE Structure Prediction
((((.......((((......(((....(((.((((((((.(((((..(........)..)))))))).......))))).)))((((((((((((((((((.(((.(......)))).))))....((((......))))...(.((.....)).)...))))))))..))))))(((((..(((((...)))))(((((((.((..((((........)))).)).)))))))....((((..(((....)))..)))).)))))..............((((((((((.......)))))).)))).....))).....)))).......))))....(((((((....(((....)))...(((((((((.....(((......)))....))))).)))).)))))))
Thermodynamic Ensemble Prediction
,{({...,.{,(((,....,{(({,.,{(({{((({({(,.{{{{{{((,,{,,,{{|{{||||,||,.....,,}},,,.,,.}}|||}|,||||(((({{.{((,(,.....,}}}.}}}}....|||{.,,,,,)))),,}}}}}}}..,||,,,||||||||}}}.|||.,||||....(((((...))))){((((((.((..((((........)))).)).)))))))|,..{||{..{{{....}}}..})))|},)))}}}|}....,,...((({(((({(..,,,,,|}||||,||}}.....{||.,,..))),.,,..,,)))),...{{(({((((((,,.....)))}}}||||||||{....}|||,,,,,})}),,,,)}))),)}}}.})}}}},
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