Forensic RNA Knowledge Base

Sequence Details

Symbol

H19:27

Sequence Length

489 nt

GC Content

0.5971

GUGUCUGCCCUCCCUGCGUCAGGACGCGGCCCUGCCCAGACCGCCCCGCCGGGCCACCAUCUCACUGCCCCGACCUCUGUCUUCUACAGAACACCUUAGGCUGGUGGGGCUGCGGCAAGAAGCGGGUCUGUUUCUUUACUUCCUCCACGGAGUCGGCACACUAUGGCUGCCCUCUGGGCUCCCAGAACCCACAACAUGAAAGAAAUGGUGCUACCCAGCUCAAGCCUGGGCCUUUGAAUCCGGACACAAAACCCUCUAGCUUGGAAAUGAAUAUGCUGCACUUUACAACCACUGCACUACCUGACUCAGGAAUCGGCUCUGGAAGGUGAAGCUAGAGGAACCAGACCUCAUCAGCCCAACAUCAAAGACACCAUCGGAACAGCAGCGCCCGCAGCACCCACCCCGCACCGGCGACUCCAUCUUCAUGGCCACCCCCUGCGGCGGACGGUUGACCACCAGCCACCACAUCAUCCCAGAGCUGAGCUCCUC

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-148.2 kcal/mol

Ensemble Metrics

Free Energy: -156.02

Frequency: 0.0000

Diversity: 156.13

Structure Visualization

Structure Prediction

MFE Structure Prediction

..(((((((........(.((((..(.((((.((...(((......((((((((............(((......(((((.....)))))........))).(((((((((((((......(((...(((((((...(((((......))))).(((((......).)))).(((((....)))))..................((((((((.....((....)).(((((...(((.((.((.........((((((((((................((((((....(((..((....((((...)))).....))..)))))))))))))))))))..)).))..)))...))))).......)).)))))).)))))))...)))))))))).))))))..)).))))))......))).)).)))).)..))))))))))))(((((.....)))))..............((((...))))...

Thermodynamic Ensemble Prediction

{,(((.(((.,,({{({,.{(((..(.((((.((...(((..,...((((((((............{{{..,...(((((.....)))))........))).(((((((((((((,.....((({{{((((((({{,{(((({.....|||||,((({,....,||.}|||,{{{||,,..)))}}..................||||{{,..{{{{{{,,..||,}|||.,{(((,....{{...,.....||{{{{||||},..........,,,,((,{,,....,{{..||,...((((...))))...,|))||))},}))}))))})))))).....|}}}},....},},....,,,,,}.,,}},,.))},,,}|..}}}))))))).))))))..)).))))))...,..})).)).)))).)..)}))}))}))).|||,|,,...||||}..............||||}}.}}}}...