Forensic RNA Knowledge Base

Sequence Details

Symbol

RNF219-AS1:3

Sequence Length

463 nt

GC Content

0.4147

GGACAUUCAUAGUUACUUGGGACAACAGUUUUAGCAGGGCUCUCUUUCUCCUUUCCUGAUCUCUCUGUUAAGCUGCCUGGCUCAUUUGAUAUCACAUCCAAAUUAUCAGCUGAUUGCUCUAUUGUUUUGGACAAUGCCCUGAAGCAUACCAAAAUGUGUCUGGAAUUGGUGGGUUCUUGGUCUUACUGACUUUAAGAAUGAAGUUGCGGACUUUUGCGAUGCCAAUAUUUUACCUCUUGGGUACUUUCUGUGUAGAAGAUUCAUAACAAGAACAAUACUUAUUCUGCAAUUCUUUAUAUAAAGCUAAAAGAAAAUGCAUUCUGCCAACAACUAAUGAGCUUGGAAGAGAACUCCAAACCCCAGAAGAGGCCUGUCACAUUGGCUAACACCUUGAUUUCCACCCACUGAGACCUUGAGCAGAGACUUCAGUUACACCCCACCCAGACUUCUGACCUGCAAAACU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-99.6 kcal/mol

Ensemble Metrics

Free Energy: -109.47

Frequency: 0.0000

Diversity: 101.17

Structure Visualization

Structure Prediction

MFE Structure Prediction

...........(((......)))...((((((.(((((.................((((..((((((((.........((((((...((((............))))(((.....))).....(((((((...((((......)))).)))))))(((..(((((..((((.((((((((((.....))))..))))))...(((((((....)))))))((((((......((((((((((...((((((...((....))...)).))))............((((.((((((...........))))))..))))....((((........)).))(((((.......)))))))))...))))))........))))))...)))).....)))))..))))))).))...))))))))..))))............(((....))).)))))))))))

Thermodynamic Ensemble Prediction

......,,,..,,,...,,,,.....((((((.(((((.................((((..((((((((.{({,....|||{((.{(((((............))))}|,}},..))}.....(((((((...((((......)))).))))))){{(..((({,,,(((({((((({((((.....)))}.,})))})...(((((({....}))))))((((((......((((((((({...,{,({{{{{({,...||...,.,||},.........,,.|(({.((((((.,.......,.)))))}..)))}.,,,{{{{........}}.)}{((({.,.....))))}}})),..})))))...,....))))))...})))..,,.,}))),,)))}})}.))..,))))))))..))))............(((....))).)))))))))))