Forensic RNA Knowledge Base

Sequence Details

Symbol

SNHG1:30

Sequence Length

240 nt

GC Content

0.4542

GACCCAUCUUUAUGCAAAGCCAGCGUUACAGUAAUGUUCCAGCAUCUCAUAAUCUAUCCUGGGGAAUUCAGCUGCCUCCCAGGGUGAAUACAGGUAUUCCUGAUGACAGUCUGCCUCUAUCUUACAGAGCAGCUUGUUGCUAUAUACCAUUGAAAAGCCUUCAGAGCUGAGAGCUUUGUUUUUCUCUAGGUACUACUAACCAAUAACCUGCUUGGCUCAAAGGGCCAGCACCUUCUCUCU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-58.7 kcal/mol

Ensemble Metrics

Free Energy: -64.52

Frequency: 0.0001

Diversity: 47.36

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.......(((((....((.(((((((...)))))))...))....)))))..((((((((((............))))))))))....((((....))))..(((((.((((.(((.......))))))).)))))......((((...(((((((....((((((...)))))))))))))....))))................((((.(((((...)))))))))...)).....

Thermodynamic Ensemble Prediction

{(,,.....,,{{(,,{,((.(((((((...})))))}...}).,..}},,,,.{(((((((((............})))))))))....((((....)))).,(((((.((({{(((.......))))))).))))),.....{{{{...((({{{,...,||{|||,..})))))))}}}}}....))),................((({{(((((...)))))))))..........