Forensic RNA Knowledge Base

Sequence Details

Symbol

SNHG1:63

Sequence Length

246 nt

GC Content

0.4634

AUGAUGAAUCAAACUAGCUCACUAUGACCGACAGUGAAAAUACAUGAACACCUGAGAAACUGGAGAACGCAGGGAGUGGGGGGUAACCAUGUCUGAGGAAUCUUUCACCCACAGCUUUGUUUUUCUCUAGGUACUACUAACCAAUAACCUGCUUGGCUCAAAGGGCCAGCACCUUCUCUCUAAAGCCCAAGAGGAGUUUGAGGAAAACUAGGUGUCUGUGUUCACUCCAGGCUGAAGUUACAGGUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-70.4 kcal/mol

Ensemble Metrics

Free Energy: -75.24

Frequency: 0.0004

Diversity: 24.3

Structure Visualization

Structure Prediction

MFE Structure Prediction

..................(((((.........)))))...........((((((((...(((((((((((((((.(((((((((..((........)).)))))))))))(((.((..(((((((((..(((.......))).......((((.(((((...))))))))).(((((((..........)))))))...))))))))).)).)))))))))))..))))).......)).))))))

Thermodynamic Ensemble Prediction

........{{{.......(((((.,.....,.))))).......,,,.((((((,{,..(((((((((((((((.(((((((((..((,....,,.),.)))))))))))(((.((..(((((((((.,(((.......}}}.......{(({{(((((...))))))))}.(((((((..........)))))))...))))))))).)).))))))))))}.,))))).......}}.))))))