Sequence Details

BLAST PRIMER
Symbol
THUMPD3-AS1:23
Sequence Length
511 nt
GC Content
0.4892
GGCGGCCGCGGCUCCGCCCCGGGUUCCCACCGCCUGAAGGGCGAGACAAGCCCGACCUGCUACAGGUGUGGAAACAGGAAGAGAACUAGAACUGGAAGUAAAGCAUUGAAGAUGUGACUGAAUUGCUGCAAUCUCAUGAUCAAAUUUGAAUGGAUGAGGAGUUGCUUUUUAGGGAUGAGCAAAGAAAGUGGUUUCUCGAGAUGGAAUCUACUGGUGAAGUUGCUGUGAACAUUGUUAAAAUGCCAAUAAAGGAUUUAGGAAUUACAGAAACCUGGUUGAUAAAGCAGUGCCAGGGUGUGAGAGAGUUGACUUCAAUUUUGAAAUAAGUUCCACUGGCUGGGUGUGGUGGCUCACACCUGCAAUCCCAGUACUUUAGGAGGCCGAGACUGGUAGAUCAUUUGAGGUCAGGAGUUCAAGACCAGCCUUGCCAACAUGGUGAAACCCCACCUCUACCAAAUUAGCCAGGUGUGGUGCACACCUGUAGUCCCAGCUACUUGGGAAGCUGAGGCAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-153 kcal/mol
Ensemble Metrics
Free Energy: -164.02
Frequency: 0.0000
Diversity: 183.8
Structure Visualization
Structure Prediction
MFE Structure Prediction
....(((.(((((......((((((.....(((((...))))).....))))))....((((((((((((....(((..............))).......((((.(..((......))..).))))((((((((((..(((....)))....)))))..))))).((((((.(((((((((....(((((.((((......)))).))))).......))))).....)))).))))))..((......))..........(((....(((((((((((....(((((......(((...(((((((....)))))))...))).....)))))(((((((((((((.....)))).)))..))))))......(..(((.(((.(((((.((.(.((((....)))).).))...))))).))))))..)..((((......))))........)))))))))))...)))))))))))))))(((((....))))).))))).)))..
Thermodynamic Ensemble Prediction
.,.,(((.{((((,,{{{.((((({.....{{{{{,..))))).,...,)))))....{(((((((((((....(((........,,....||}..,{,...(((((...}}})}..}|((({{,({(,.((((((({{((.....,......,|{{{{{{{{(((((((..(......)..}}}}}}}||}}}}}}.,,.,|||||}||||,,,,,.{{{.((((({..,((.(((({,,.((......)),))))).)))))))}..}|((({((,...,,.}}}.||||||{{{(...(((((((....)))))))...}}}..,,)),))}||,((((((((,,..,}}))))})},.,)))}}}.{{|..|,,|{{{{,,.||))|.}}})},,|))))}))).))))),..|||||,||||||,...|||||,.,,,.|||||{{|,,...,)}),.))))},))).)))))))))))|(((({.....)))),))))).)))..
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